KEGG   Rhodamnia argentea (silver malletwood): 115754482
Entry
115754482         CDS       T10595                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X2
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    115754482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rarg04121]
    115754482
   03036 Chromosome and associated proteins [BR:rarg03036]
    115754482
Enzymes [BR:rarg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115754482
Ubiquitin system [BR:rarg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115754482
Chromosome and associated proteins [BR:rarg03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     115754482
    Noncanonical PRC1 (PRC1.1)
     115754482
    Noncanonical PRC1 (PRC1.3/1.5)
     115754482
    Noncanonical PRC1 (PRC1.6)
     115754482
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-UDP zf-RING_6 zf-RING_10 zf-Nse zf-RING_11 ZNF512_C2HC
Other DBs
NCBI-GeneID: 115754482
NCBI-ProteinID: XP_030549356
UniProt: A0A8B8QQ94
LinkDB
Position
7:6185806..6192783
AA seq 475 aa
MPAQKRSLPENANDEDASQQSHHHHNHHHAKQSRRDEEPEQDGQQAGEPQGGGGGAGEEE
EDSQGSPSSSSEEKPEFVYVKLSDIRKDVQCPICLGIIRKTRTVMECLHRFCRECIDKSM
RLGNNECPACRTHCASRRSLRDDPNFDALIAALYPDIDKYEEEELAFHEEERNRNKQIQA
SIAQILQRQSEALVKRRSLGKDAAGGFITRSQRNLRPSTRRRRNSRGIDHQGSEDNEDEH
DSNGGKDSSSADERGTEVRQRRRRKRTGVRSSLPSSSADVECLDNDLEATRDTRGISPGL
VWNPEMLAWGKGGTRSHTRHGGINGNNKNSKNMRLSKLVEYLKSLEENDELDIYLMLVSL
DKESTPSLKQPYLCSRRSLSVKHLCDYVAHQTPLQAEEVEISVVKGNHNISRQGPSLNLF
SSASECENVLPVVDPQKAELQILEKEATLAGILADNGSISDYLILGYRQKRPSNS
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgcctgcgcagaagcggtccttgccggagaatgcgaacgatgaggacgcctcgcaacag
agccatcaccaccacaaccaccaccacgccaagcaatctcgccgcgacgaagagcccgag
caagacggccagcaggcgggagagccgcaaggcggaggcggcggagctggagaagaagaa
gaagattctcaaggaagtccgtcgtccagctcggaggagaaacctgaatttgtctatgta
aaactatcagacattcgtaaagatgtacaatgcccaatctgtctaggcatcatccggaaa
acgcgaactgttatggaatgcctgcaccgcttttgtagggaatgcatcgacaaatcgatg
cgactggggaacaatgaatgccctgcttgccgcactcactgtgccagccgacgctcactg
agagatgatcccaactttgatgctttaatagcagctttatatccggacattgacaaatac
gaggaagaggagttggcttttcatgaagaagagagaaatcgcaacaagcagattcaagca
tccattgctcaaattcttcaacggcagtcagaagcacttgtcaaaagacggtcgctgggt
aaagatgcagctggtggatttatcacaagatcacagcggaatctaaggccttctactaga
agaagacggaattctcgaggaattgatcatcaaggttccgaagacaatgaagatgaacat
gatagtaatggtggcaaagattcatcttccgctgatgagcgtggtaccgaagttaggcag
agacgtcggagaaaaaggacaggagtgcgttcatcattaccttcttcatcagctgatgtt
gaatgcctggataatgatttggaagcaaccagagataccagaggaatttctcctgggctc
gtatggaacccagaaatgcttgcatggggtaagggtggtacgagaagtcacacgagacat
ggtggcataaacggtaacaacaagaactctaagaacatgcggttatccaagctggttgag
tacctcaagagtttagaggaaaatgatgagttagacatttatctcatgcttgtttctctg
gataaagaaagtactccgagtctgaagcagccctacttatgcagcaggcggagtctgtca
gttaaacatctatgtgattatgttgctcaccaaacacctctgcaagctgaagaagttgaa
atatcggtggtcaaagggaaccataacatcagccgtcaaggacctagcctgaatcttttc
tcctcagcaagcgaatgtgaaaatgttctccccgttgtcgatccgcagaaggctgagctg
caaattctggaaaaggaagcgacgcttgcagggatacttgcagacaatggatccatcagt
gactatctgattctaggatacaggcagaaacgaccctccaactcctga

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