Rhodamnia argentea (silver malletwood): 115754531
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Entry
115754531 CDS
T10595
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rarg03036
]
115754531
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rarg04812
]
115754531
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
115754531
Cytoskeleton proteins [BR:
rarg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
115754531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Vac14_Fab1_bd
HEAT_2
PDS5
Adaptin_N
Cnd1
Tti2
MMS19_C
UTP20
INTS1_R4
HEAT_DAAF5
MMS19_N
Npa1
TTC3_9th
Dopey_N
SEN1_N
Motif
Other DBs
NCBI-GeneID:
115754531
NCBI-ProteinID:
XP_030549432
UniProt:
A0A8B8QT09
LinkDB
All DBs
Position
1:complement(5718545..5730580)
Genome browser
AA seq
1432 aa
AA seq
DB search
MEEALELARAKDTKERLAAVERLYQLLEASRKSLSVPETASLVDCCLDLLKDNNFRVCEG
SLQALASAAVLSGEHLKLHLNALVPTVVERLGDGKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSFAWTHKNWRVREEFARTVTSAIGLFSSTELPLQRAILPPILQMLNDSNHGVREAAI
SCIEEMYTQAGSQFRDELQRHHLPSAMVKEINARLEKLEPQIRSSNGLTGNFAAIDTKPT
SHNPKRNSPRAKSSTRDMSLFGAEGDVTVKPVEPITVYSDKELIREFEKIASTLVPDKDW
SVRIAAMQKIEALVLGGAADSPCFKGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKE
LLGDFEACAELFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVSRVLPRLADGAKNDRN
AVLRARCCEYALLILEQWPDAPEIHRSADLFEDLIRCCVADAMSEVRSTARLCYRMFSKT
WPERSRRLFLSFDPVIQRILNEEDGGLHRRHASPSIRERSAHMSSAHTSAHTSLPGYGTS
AIVAMDKTSSLSSGTSLSSGLLLSQTKAAGKGAERSLESVLHSSKEKVSAIESMLRGLDV
SDKRNPSALRSSSLDLGVDHPSSRDPPSPHAIPASNQSSLASDSSASVIGRGSNRNGGLG
LSDIISQIQASKDSVKSSYRGNAVTETLSAFSAYSARRTSEKLHERSSVEEKSDIREARR
LTNLHMERQYMDTPHRDGSLRDLQSSHVPNFQRPLSRKAVVGRMTASRRRSFDDSQLALS
DLSSYVDGPASLSDALSEGLSPSSDWSARVAAFSYIKSLLQQGPRGIQEVIQNFEKVMKL
FFQHLDDPHHKVAQAALSTLADIIKSCRKPFESYMERIVPHVFSRLIDPKELVRQPCSAT
LEILSKSYSTDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHVANSEGSGNIGILKLW
LAKLIPLAHDKNTKLKEAAISCLISIYSHYDSTAFLNFILSLSVEEQNSLRRALKQYTPR
IEVDLMNYLQSKRERQRSKSGYDPSDVVGSSSEEGYIGQQRTASFFGRYSAGSLDSNGGR
KWSSMQDSSLPTGGIHVASNETRDDLYRDFSDSKSEDLSCTINLTDNNVVSQTGRIEHVS
TMSLEGLSSPQVDINVMSSSDLGAAENCSPDGEASAEVDLDNRNFSASKGNALTDEPSIP
QILHMIGNANDDLSSSNRRSGLQQLIAISQASDISIWTKYFNQILTIVLEVLDDSDSLIR
ELGLLLITEMLQNQKDMMEESIEIVIEKLLHANKDDVAKVSNEAEHCLSVVLSKYDPFRC
LSVIVPLLVTEDEKMLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKT
VVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARMGTAIDTNHV
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggccttggagctcgcgcgcgccaaggacacgaaggagcgcttggccgccgtg
gagaggctctaccagctcctcgaggcctccaggaagagcctctccgtccccgagacggcg
tcactcgtcgactgctgcttggatctcctcaaggacaacaacttcagggtttgcgagggc
tcgctccaggctctggcctccgcggccgtcctctccggcgagcacttgaagctgcacttg
aatgcgctcgtccccaccgtcgtcgagcgcctcggagacggcaaacagcctgtgagggat
gccgcccggaggctgctgctcactctcatggaggtttcttcgccaacaataattgttgaa
agggctgggtcttttgcttggactcacaaaaattggagagtcagagaagagtttgctcgg
actgtgacttctgcaattggtctcttttcatctacagagcttcctcttcagcgggccatc
cttccgccgattttgcaaatgttgaacgactcaaatcatggtgttagagaagcagctata
tcatgcattgaggagatgtatacacaggctgggtctcagtttcgtgatgagcttcaaagg
catcatctcccttcagcaatggtgaaagagatcaatgcaagattagagaagctcgaacca
caaattcgtagttcaaatggacttacgggtaattttgctgccatagatacaaagcctaca
agtcataaccctaaacgaaatagtcccagggcaaagagttctaccagggatatgtctcta
ttcggagctgaaggtgatgtcaccgtaaaacctgtagaaccaattacagtatactcagac
aaagagctgataagggaatttgagaagattgcttctacccttgtgccggataaagattgg
tcagttcgcattgctgccatgcagaaaatcgaagcactagttcttggaggtgctgctgac
tccccatgtttcaagggacttttgaagcaacttgtgggccctctgagcacacaattgtct
gacagaaggtccagcatagtgaagcaggcttgccacctgctatgctttttatccaaggag
ctcctgggagattttgaagcgtgtgccgagttgttcattccagttcttttcaagctagtt
gtgatcactgtccttgttattgcagagtctgctgataattgtataaaaacgatgttgcgt
aactgcaaggtttcacgtgtgcttcctcgcttagccgacggtgcaaagaatgaccgaaat
gcagtacttcgtgcaaggtgttgcgagtatgcattgttgatattggaacaatggcctgat
gcgccagaaatacatcgatctgctgatctttttgaggatcttataagatgttgtgtcgcc
gatgcaatgagtgaggttcgatccacagccaggttgtgctacagaatgttttcaaaaact
tggccagagcgctcccgccgcctgtttttatcttttgatcctgtgattcagaggatacta
aatgaagaagatggtggcttgcacaggcgacatgcttctccttcgattcgtgagagaagt
gcacatatgtcgtccgctcatacctctgctcatacaagtttacctggatatggaacttct
gctattgttgcaatggataaaacgtctagtttgtcctcagggacttctctttcttcaggg
ctgcttttgtcacaaacaaaagcagctggtaaaggtgctgagcgtagtcttgaaagtgtg
ttacattcaagcaaagagaaggtcagtgccattgaaagcatgcttagaggcttggatgta
tctgataagcgcaatccttctgctcttcgttcatctagtctggatttaggagttgaccat
ccctcttctcgtgatccgccatctccacatgcaattccggcttctaaccagagctcttta
gcctcagattcatctgcatctgttatcggcaggggtagcaaccgaaatggtggcttgggt
ttatccgatatcatttctcaaattcaagcttccaaggattctgtcaagtcatcctatcgt
ggtaatgcggtaactgagactttgtcagcattttctgcctattcagcaaggagaacttca
gagaagctgcatgaaaggagttcagttgaggagaaaagcgacattagggaagctaggcga
ttgacaaatctgcacatggagaggcaatatatggacacaccacacagagatggaagttta
agggatttacagagcagtcatgtccccaacttccagagaccgctttcgagaaaggctgtg
gtgggaagaatgactgcaagcaggaggagaagctttgatgatagccagctagcactgagt
gatttatcaagttatgtggatggtccagcatctctcagcgatgctcttagcgagggtctt
agtccaagttctgactggtctgctagagttgctgcttttagttatataaagtctctgctg
cagcaaggaccaagaggtattcaagaagttatccaaaactttgagaaggtcatgaagcta
tttttccagcatttggatgatccacaccataaagttgcacaggcagctctttccactctt
gctgacatcattaaatcgtgccgcaaaccctttgagagttacatggaaaggatcgtacca
catgttttttcgcgtttaattgacccaaaagagttagttcggcagccttgctcagcaact
ctagaaattttgagtaaatcatacagtacagattctctactacctgctttgcttcgatca
ctcgatgaacaacgctctcccaaggcaaaattggcagtgatagaatttgccatcaattct
tttaacaagcatgtggcgaactctgaaggttctggtaatattggtatattaaaactatgg
cttgctaagttgattcccctagcgcatgataaaaatacaaagctcaaggaagcagctatt
tcttgtctcatatcaatttactcccactatgattcgactgcatttctcaattttatccta
agtttgtctgttgaggaacagaattccttgagacgagctcttaaacagtatactcctcgt
attgaagttgatctgatgaactatttgcaaagcaagagagagcgacagcgttccaagtct
ggttatgatccttctgatgttgtcggctcatcatctgaagaaggatatattggtcagcaa
aggacggctagtttctttggcaggtattctgctggttccctagacagtaatgggggcaga
aagtggagttctatgcaagattcgtcccttcctactggtgggattcatgtagcatctaat
gaaactcgtgatgacttgtaccgtgacttctctgattccaagtctgaagatctgagctgc
acaataaatctcactgacaataatgtagtttcccagactggtcggattgaacatgtgtct
accatgagtctggagggcttgtccagtccccaggtggacatcaatgttatgagcagttct
gaccttggagctgctgaaaactgcagtcctgatggtgaggcttcagctgaggttgacctt
gacaatcgcaatttttcagcttctaagggtaatgcattgacagatgagccgagtattccc
caaattctacacatgatcggtaatgccaatgatgatctttcatcttcaaatagaagatct
ggacttcagcaactaattgcaatatctcaggccagtgatatttctatttggacaaagtat
ttcaatcaaattttgacaattgtacttgaggtgttggatgattctgactccctcatccgt
gaacttggtcttttgttgatcactgaaatgctccagaatcagaaagacatgatggaagag
tctatcgagattgtaattgaaaagctgcttcacgctaataaggatgacgtggccaaggtt
tcaaatgaagctgagcattgcttatctgtcgtattgtccaagtatgatcccttcagatgt
ctaagtgttattgttccattgttggtcactgaagatgagaaaatgcttgttacttgcata
aattgtttgacaaagcttgtgggacggctatcacaagaggagctgatggcccagttacca
tcatttttgcctgctctttttgaagcatttgggaaccagagtgctgacgttcgcaagact
gtagttttctgtctggtagatatatatatcatgcttgggaaggcattcttgccatacttg
gaaggcctcaacagtacgcaattgcgcttggtgactatctatgctaatcgtatatcgcaa
gccaggatgggtactgcaatagacactaatcatgtttag
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