Rhodamnia argentea (silver malletwood): 115754607
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Entry
115754607 CDS
T10595
Name
(RefSeq) coatomer subunit alpha-2
KO
K05236
coatomer subunit alpha
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rarg04131
]
115754607
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rarg04147
]
115754607
Membrane trafficking [BR:
rarg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
115754607
Exosome [BR:
rarg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115754607
Exosomal proteins of bladder cancer cells
115754607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
TPR_COPA_B
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_Aladin
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_At4g14310
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
115754607
NCBI-ProteinID:
XP_030549538
UniProt:
A0A8B8QT06
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Position
5:complement(12804566..13300993)
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AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTCRCLFTLLGHLDYIRTVQFHHEHPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDISALKKQDSVPGDDLLR
LGQMNTDLFGGVDVVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILSSHP
EMNLLAAGHDSGMIVFKLERERPAFAVSSDIIFYTKERFLRIYEFSSQRDTQVIPIRRPG
STSLNQSPKTLSYSPTENAVLICSDVDGGSYELYVIPKDSAGRGDGVQEAKRGTGGSAVF
VARNRFAVLDKSSNQVLVKNLKNEIVKKSGLPFPADAIFYAGTGNLLCRAEDRVYIFDLQ
QRLVLGDLQTPFIKYVVWSNDMESVALLSKHAIVIASKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYM
FKLSLLKKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYSYQRTKNLERLSFLYLITGNMDKLTK
MLKIAEVKNDVMGQFHNALYLGDVQERVKILENAGHLPLAYATASAHGLRDVAERLAAEL
GDSVPSLPEGKRPSLLMPRMPVMCGGDWPLLRVVKGIFEGGLDNVGKGTADEEEEEEAEG
DWVDELDMVDVNGLANGDVTAIMEDGEVGEENEEGGWDLEDLELPSEAETPRASVNARSV
VFVAPTPGMPVSQIWTQRSSLAAEHAAAGNFDTAMRLLSRQLGIRNFTPLRTMFLDLHTG
GHTYLRAFSSAPVVSLAVERGWNESASPNVRGPPALVYNFSQLEEKLRAGYRATTAGKFT
EALRLFLSILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELNRREIRDNPVRQQEL
AAYFTHCNLQMPHLRLALLNAMTVCYKAKNLATAANFARRLLETNPTVENQARTARQVLQ
AAERNMIDASELNYDFRNPFVVCGATYVPIYRGQKDVSCPYCSSRFVPSQEGQLCTVCDL
AVVGADASGLLCSPSQVR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagttcgagacgaagagtaatcgggtgaaggggctcagcttccacagcaag
aggccgtggatcctcgcgtcgctccacagtggcgtgatccagctatgggattaccgcatg
gggactctgatcgatcggttcgatgagcacgacggccctgttcgaggggtgcatttccac
aagtcgcaacctcttttcgtgtctggaggagacgattacaagattaaagtttggaactac
aagacatgcaggtgtctttttacccttctaggacaccttgattatatccgtaccgtgcag
ttccatcatgaacatccgtggatagtgagtgccagtgatgatcaaactattcgcatatgg
aactggcagtctcgtacttgcatatctgtcttgacaggtcacaatcattatgtcatgtgt
gcttcattccacccgaaagaggaccttgttgtctcagcttcccttgatcagactgttcgt
gtatgggatatcagtgccttaaaaaaacaagacagcgtccccggtgatgacttactgcgg
ctgggtcaaatgaatacagacttatttggtggtgtggatgttgttgtcaagtatgtcttg
gaaggccatgaccgaggagtcaactgggctgcatttcatcccacccttcccctgatagtc
tctggtgcagatgatcgccaagtaaagttatggcgcatgaatgataccaaggcttgggaa
gtggacactctcagagggcacatgaacaacgtgtcttgtgttatgttccatgcaaaacaa
gacataattgtgtccaactcagaagacaaaagtatccgcgtttgggacgcaacaaagcga
actggaattcaaacatttcgacgtgagcatgaccgtttctggatactgtcttctcatcct
gaaatgaatcttttggcagctggtcatgacagtggcatgatagtctttaagttggagaga
gagcgacctgcctttgctgtgagcagtgatattattttctacaccaaagaacgtttcttg
cgcatttatgagttttctagtcaacgggacactcaggttattcctattcgacgccctgga
tctaccagcctcaaccaaagtccaaagacactctcttatagtcctacagaaaatgctgtt
cttatttgctctgatgtggatggaggatcttatgaactgtatgtcattccgaaagacagt
gccggtaggggtgatggtgttcaagaggcaaagagaggcactggaggatctgctgttttc
gtggcccgaaatagatttgcagtgcttgacaaaagtagcaatcaagtactggtgaagaat
ctgaaaaatgagattgttaagaagagcgggcttccatttcctgcagatgccatcttttat
gcaggaaccggtaatttgctgtgtagggcagaagacagagtttacatatttgatctccag
cagaggctggttcttggtgatctgcagacccctttcatcaaatacgtagtgtggtcaaat
gacatggaaagtgttgccttgctcagcaaacatgcaattgttattgctagcaagaagctc
gtccaccaatgcactctccatgagaccattcgggtgaagagtggagcctgggacgacaat
ggagtattcatctacactacgctgaaccacattaagtattgccttcctaatggcgatagt
ggaataattagaactcttgatgtccctatctacattacgaaggtttcaggtaacaccatc
ttttgtttggatcgtgatggaaagaatagagctatagttatcgatgcgacagagtatatg
ttcaagttatcccttctgaagaagagatatgatcatgttatgagcatgataaggaattct
cagctttgtggacaggctatgattgcatatctgcagcaaaaggggttccctgaagtggct
cttcattttgttaaggacgagaggacacggttcaatttggctctagagagtggcaacatt
caaattgcagttgcatcagctaaggaaattgatgagaaggaccattggtatagactgggg
gttgaggcccttcgccaaggcaatgcgggaattgttgagtactcttatcagaggacaaag
aaccttgagaggctctcttttctctatctcataactggaaatatggacaaattgaccaaa
atgttgaaaattgctgaagtgaagaatgatgtaatggggcaatttcataatgctttgtac
ttaggtgatgttcaagagcgtgttaagatattagagaatgccgggcatttgcctcttgct
tatgctactgcttctgctcatgggctgcgggatgttgctgaaagattggcagccgagttg
ggagattctgttccgtctttgccagaggggaagcgaccttcccttctgatgccgcgaatg
cctgtcatgtgtggtggtgattggccccttttgagagtcgtgaaaggcatatttgaaggt
gggttggataatgttggcaagggtactgcagatgaagaagaagaagaggaggctgaaggt
gattgggtagatgaactggatatggttgatgtgaatggtttagcgaatggtgatgtgaca
gctattatggaggatggtgaagttggtgaagaaaatgaggagggaggttgggatctcgaa
gatttggagctcccttccgaggcagaaactccaagggcttctgtcaatgctcgctccgtg
gtttttgttgccccaactcctggcatgccagtaagtcaaatatggacacagagatcgtct
cttgctgctgaacatgcggctgctggtaattttgacactgcaatgaggttgttgagtagg
caacttggaattcggaatttcactcctttgagaacaatgttccttgatctccacactggc
ggccacacctatctacgcgcattctcctctgctccagtggtatccctggctgttgagcgt
ggttggaatgagtctgctagcccgaatgtccggggaccaccagcacttgtctacaacttc
tcccaattggaagagaagctcagggctggttatcgtgccaccacagccgggaaatttact
gaggctcttcgtcttttcctgagtattctccacacaattccacttattgtggttgaatca
agaagggaagttgatgaagtcaaggagctgatcatcattgttaaagaatatgtcttgggt
ctgcaaatggagcttaataggagagaaattagggacaatccagtgcgccagcaggaactc
gcagcctacttcactcactgcaatcttcaaatgcctcacttgcggcttgccttactgaat
gcaatgactgtctgctacaaggcgaagaaccttgctaccgcagctaactttgctcggcgg
cttctagaaaccaatcccactgttgaaaaccaagcaaggacggcaaggcaagttctgcag
gctgctgagaggaacatgattgatgcttctgagctaaactacgatttcagaaacccattt
gtggtctgtggagcaacgtatgtgcctatataccgagggcagaaggatgtctcttgtcca
tactgcagctccaggtttgtgccgagccaggaggggcagctttgtactgtgtgtgatctt
gctgtggttggagcagatgcttcaggattactgtgctccccatctcaggtgcggtga
DBGET
integrated database retrieval system
