Rhodamnia argentea (silver malletwood): 115754609
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Entry
115754609 CDS
T10595
Name
(RefSeq) coatomer subunit alpha-2-like
KO
K05236
coatomer subunit alpha
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rarg04131
]
115754609
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rarg04147
]
115754609
Membrane trafficking [BR:
rarg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
115754609
Exosome [BR:
rarg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115754609
Exosomal proteins of bladder cancer cells
115754609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_EML
TPR_COPA_B
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
115754609
NCBI-ProteinID:
XP_030549540
UniProt:
A0A8B8QR93
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All DBs
Position
5:12980745..12988251
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AA seq
1218 aa
AA seq
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MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTCRCLFTLLGHLDYIRTVQFHHEHPWIVSSSDDQTIRIW
NWQSRTCISVLTGHNHYVMRASFHPKEDLVVSASLDQTVRVWDISALKKKTASPGDDLLR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWATFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKHDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILASHP
EMNLLAAGHDSGMIVFKLERERPPFAVSNDILFYTKDRFLRCYEFSSQQDTQVTPIRRPG
STSLNQSPKTLSYSPTENALLICSDVDGGSYELYVILKDSAGRGDSVQEAKRGAGGSAVF
VTRNRFAVLDKSSNQVLVKNLKNEIVKKSGLPFAADAIFYAGTGNLLCRAEDRVYTYDLQ
QRLVLGELQTPFIKYVVWSNDMESVALLSKHAILIACKKLVHKCTMHETIRVKSGAWDDN
GVFIYTTLNHIKYYLPNGDTGIIRTLDVPIYITKVTGNTIFCLDRDGKNRAMVIDAMEYT
FKMSLLKKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFHLALESGNI
QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNIDKSTK
MLKIAEVKNDVMGQFHNALYLGDVRERVKILENAGQLHLAYTSASVHGLQDVAERLAAEL
GDSIPSLPDGKRPSLLMPPIPVICGGDWPLLRVMKGVFEGGLDNVGKGTAGEDEEGVEGD
WGEELDMVDANGLPNGDVTAIMDDDEAGEENKEEGGWDLEDLELPPEAETPRASVSSRQT
VFVAPTPGMSVSQIWIQKSSLAAEHAAAGNFETAMRLLNRQLGIRNFATLRSMFLDLHSS
SHAYLRAFSSAPVISLAVERGWSESATPNVRGPPAVIFSFSQMEEKLRAGYRATTAGKFT
EALRLFLSVLHTIPLIVVESRRAVDEVKELIVIVKEYVLGLQMEVGRREIKDNPVRQQEL
AAYFTHCNLQVPHLRLALLNAINVCYRARNLATAANFARRLLETNPTIENQAKTARQVLQ
AAERNMTDAAALNYDFRNPFVVCGATYVPIYRGQKHVCCPFCSAQFLPSQEGQVCSVCDL
AVVGADASGLLCCPSQVR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgagaccaagagtaatagggtgaagggactcagtttccacagtaag
agaccgtggatccttgcgtctctccatagtggcgtgatccagctgtgggattatcgcatg
gggactctgattgatcggtttgatgagcatgatggccctgttcgtggggtgcatttccac
aagtcacaacctctttttgtatctggaggagatgattacaaaattaaagtttggaactac
aagacatgcaggtgccttttcacccttctaggacatcttgattacatccgtaccgtgcag
ttccatcatgagcatccgtggatagtgagttctagcgatgatcagactattcgcatatgg
aactggcagtctcgtacttgcatctctgtcttgactggtcacaatcattatgtcatgcgt
gcttcattccacccgaaagaggaccttgtcgtgtcagcttcccttgatcaaaccgtgcgt
gtatgggatatcagtgccttaaaaaagaagacagcttcccctggtgatgacttgttgcgg
ctgagtcagatgaatacagacttatttggtggtgtggatgctgttgtaaagtatgtcttg
gaaggccatgatcgaggtgtcaactgggctacatttcatcccaccctgcccctaattgtc
tctggagcagatgatcgccaagtaaagttatggcgcatgaatgatacaaaggcttgggaa
gtggacactctcagagggcacatgaacaacgtgtcttgtgttatgttccatgcaaaacac
gacataattgtatccaattcggaagacaaaagtatccgtgtttgggatgcgacaaagaga
actggaattcaaacttttcgacgggagcatgaccgtttctggatacttgcttctcatcct
gaaatgaatcttttggcagcgggtcatgacagtggcatgatagtgtttaagttggagaga
gagcgacctccctttgctgtgagcaatgatattctgttttacaccaaagaccgtttcttg
cgctgttatgagttttctagtcagcaggatacccaggttactcctattagacgccctgga
tctaccagcctcaaccaaagcccaaaaacgctctcttacagtcctacagaaaatgctctt
cttatttgctctgatgtggatggaggatcttatgaactgtatgtcatactgaaagatagt
gctgggaggggtgacagtgttcaagaggcaaagagaggtgctgggggatctgctgttttt
gtaactcgaaataggtttgcagtgcttgacaaaagcagcaatcaagtattggtaaagaat
ctaaagaatgagattgttaagaagagcgggcttccttttgctgcggatgcaattttttat
gctggaaccggtaacttgctgtgtagggcagaagacagagtctacacatatgatctccag
cagaggttggttcttggtgagctgcaaaccccctttatcaaatatgttgtgtggtcaaat
gacatggaaagtgttgccttgctaagcaaacacgcaattcttattgcttgcaagaagctt
gtccacaaatgcactatgcatgagaccattcgtgtaaagagtggagcctgggatgacaat
ggtgtatttatctatactacattgaaccatattaagtactacctccctaatggtgatact
ggaattattagaactcttgatgtgcctatctacattactaaggttacagggaatacaatc
ttttgcttggaccgtgatggaaagaacagagctatggttattgatgcaatggagtatact
ttcaagatgtctttgctgaagaagagatatgatcatgtcatgagcatgataaggaactct
caactctgtgggcaggctatgattgcatatctgcagcaaaagggatttcctgaagtggct
cttcattttgtaaaggatgagaggacacggttccatttggctctggagagtggcaacatc
caaattgcagttgcctcagctaaggaaattgatgagaaggatcattggtacagattgggg
gtcgaggctcttcgccaaggcaatgccggcattgttgagtatgcttatcagaggactaag
aactttgagaggctttctttcctttatcttataactggaaacatagacaaatcgaccaaa
atgctgaaaatcgccgaagtgaagaatgatgtcatggggcaatttcataatgctttgtac
ttaggagatgttcgagagcgtgttaagatattagagaatgctgggcagttgcatcttgct
tatacgtctgcttcagtgcatgggttacaggatgtagctgagaggctagcggctgaattg
ggagattctattccttctttgccagatggaaagcgaccttcccttttgatgcccccaata
cctgtaatatgtggtggtgattggcctcttttgagagtcatgaaaggcgtattcgaaggt
gggttagataatgtcggcaagggtactgcaggtgaagatgaagagggtgtcgaaggtgat
tggggagaggaactggatatggttgatgcgaatggtttacccaacggagatgtgacagct
attatggacgatgatgaagctggtgaagaaaacaaggaagagggaggctgggaccttgaa
gatttggagcttcctcctgaggcagaaacccctagggcttctgtaagttctcgccaaact
gtttttgttgccccaactccgggcatgtcagtgagtcaaatatggatccagaaatcgtct
cttgctgctgaacatgcagccgctggtaatttcgaaacagcgatgaggctactgaatagg
caactcggaattcgtaattttgctacattgagatccatgttccttgatcttcacagtagc
agccacgcctatctacgtgccttctcttctgctccagtgatatctctggctgttgagcgt
ggttggagtgagtctgcaacccctaatgttcggggtccaccagcagttattttcagtttt
tctcaaatggaagagaagctcagggctggttatcgggccacaacagcagggaaatttact
gaggctcttcggctcttcctcagtgttcttcacacaattccacttattgtggtggaatca
agaagagcagttgatgaagttaaggagttgatcgtcatagtcaaagagtatgtcttgggt
ctgcaaatggaggttgggaggagagaaattaaggacaatcctgtgcgccagcaggaactt
gcagcctacttcacgcactgcaatcttcaagtgcctcacttgaggctggccttgctgaat
gcaattaatgtatgctacagggcaagaaaccttgctacagcagcaaactttgcccgacgg
cttctagagaccaatcccaccattgaaaatcaagcaaagacggcaagacaagttctgcag
gcggctgagaggaatatgacagatgccgctgcgctaaattatgattttagaaatccattt
gtggtatgtggggctacctatgtgccaatataccgaggacagaagcatgtatgctgccca
ttctgcagcgcccagtttttgcctagccaggaagggcaggtttgtagtgtgtgtgatctt
gcagtggttggagcagatgcttcaggattactctgttgcccgtctcaggtacgatga
DBGET
integrated database retrieval system
