Rhodamnia argentea (silver malletwood): 115754615
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Entry
115754615 CDS
T10595
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115754615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115754615
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
115754615
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
SWI2_SNF2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
115754615
NCBI-ProteinID:
XP_030549550
UniProt:
A0A8B8QRA3
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Position
5:12711174..12721275
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AA seq
909 aa
AA seq
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MQFGLDVEAFFVDSGSADGRYSGGHKKMKFSGDGNDQRRPSSFRSIFNVSEGENGKTSSG
VVDYSDPFAIHRMLDKVDCGQYGSVTKDVEAVIFQKMQYLTPLINLSNGLLNSVVNPRKE
ASNLAGEPAANSGHKNIIDLDDDGARNDAPEAAQPVLILDDSDKEDHTNWKPSYPFQQIF
LATQAGVAGHCPVGDIAVKNYRNIAQGDGLLNTETETEKDKGVYVGVDNEDDHLTKVVDD
GLGDIWTEMTMALECSKDIAEDMENWEHPSSDDNSSEEIEDCDHSFVLKDDIGYVCRVCG
VVDRKIETIFEFQYNKVKRSNRTYVSDIRKGSDASGLAGFDLPLDDLAVTEIAAHPRHMK
QMKPHQVEGFNFLVSNLITDNPGGCILAHAPGSGKTFMMISFMQSFLAKYPHARPLVVLP
KGILPTWKKEFQTWQVEDIPLLDFYNKADSRSQQLEVLKQWINQKSILFLGYKQFSAIVC
DSGASAHSIKCQEILLEAPSLLILDEGHTPRNENTDVLQSLAKVQTPRKVVLSGTLYQNH
VKEVFNVLNLVRPKFLKLDSSRVVIKRILSRANMSGIRKQLTGGKDTCFYDLVEHTLQKE
TDFKRKATVIQDLREMTKKVLHYYKGDFLDELPGLVDFTVVLNLSSKQRREVQNVKRLPR
KFKMNSVGSAVYLHPKLKHLTHSSVATNGNSKSVDPETIIKIDELLEKLDVKQGVKAKFF
LNILRLCESAGEKLLVFSQFLLPLKFMERLVMKVRSWSLGREIFFISGESSTEERESSME
QFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKRKVYA
YRLVAADSPEEEDHVTCFKKELISKMWFEWNEYRGFQDFDVETVDTKECGDPFLENPFLH
EDVKVLYKR
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcggtttagatgtcgaggcctttttcgtcgactccggctccgcagacgggagg
tactctggagggcacaagaaaatgaaattctctggggatggaaacgatcagcgcagacca
tcctccttcagatcaatttttaatgtatctgaaggggaaaatggtaaaacttcttccggt
gttgttgactactccgatccttttgcaatccatcgtatgctggacaaggtggattgtggt
caatatggcagtgtcaccaaggatgtagaagcagtgattttccagaagatgcagtacttg
acccctctcattaatctttcaaatggtttgttaaattctgtggtaaacccaagaaaggag
gcctcaaaccttgctggggaaccagctgcaaattctgggcataagaatattatcgatttg
gatgatgatggtgcgagaaatgatgctccggaagcagcacaacctgttttaattcttgat
gattcagacaaggaagaccatacaaactggaaaccgtcatatccttttcagcagattttc
ttggcgacacaagcaggagttgctgggcattgtcctgtgggagatatagcggttaaaaac
tacagaaacatcgctcaaggagatgggcttctgaatactgaaactgaaactgagaaagac
aagggcgtatacgtgggtgtagacaatgaagatgatcacctaacaaaggttgttgatgat
ggtcttggggatatctggactgagatgacaatggcattggaatgttcaaaggatattgct
gaagatatggagaactgggagcatccttcatccgatgacaattcaagtgaagagatcgag
gactgtgaccattcatttgttctcaaggacgatatcggctatgtttgtcgggtgtgcggg
gtggttgataggaaaattgagaccatatttgagttccagtataataaagtaaagaggagt
aataggacgtacgtgtctgatatccggaaaggcagcgatgcttcagggctggctggtttt
gacctgccgctggatgatttggcagtgacagagatagctgctcatccaaggcacatgaag
cagatgaaacctcatcaagtggagggcttcaactttcttgtcagtaacttaatcactgat
aatcccgggggctgtattctggcccatgctccaggatccgggaagacatttatgatgatc
agcttcatgcagagcttccttgcgaagtatcctcatgccaggcctcttgtggtgcttcct
aaaggaatattgcctacatggaaaaaggaatttcagacatggcaggtggaggacatccca
ttgctcgacttttataataaagcagatagcaggtcccagcaattggaggttttgaagcaa
tggatcaatcaaaaaagcatacttttcttgggatacaagcagttctctgcaattgtttgc
gactctggtgccagtgctcattctattaaatgtcaggaaatactgctggaagccccgtca
cttcttattttggatgaagggcacacaccccggaatgagaacactgatgttcttcaatct
cttgccaaagtgcagacaccaaggaaagttgtcctttcaggaactctctatcaaaatcat
gtcaaagaggtattcaatgtgttaaatcttgtccgtcccaagttcctgaaactggactct
tcacgagttgtcattaagcgcatcttgagtagggcaaacatgtctgggattaggaagcag
ttgacaggtggaaaagacacttgtttctacgacttggtggagcatactttgcagaaggaa
accgactttaagaggaaagctactgtcatccaagatttacgcgagatgacaaaaaaagtt
ctccattattataaaggtgatttcttggacgagctccctggacttgttgacttcactgta
gtgctgaatcttagttccaaacagaggcgcgaagtgcagaatgtgaagaggcttccacgg
aagttcaagatgaattctgttggaagtgctgtttatctgcatccaaaattaaaacattta
actcatagttccgttgcaactaatggtaatagtaagtctgtggatcctgagactataatt
aaaattgatgagctgctggagaagttagatgtgaagcagggagttaaggcaaaattcttt
ctaaatatcctgagattgtgcgagtctgcaggggagaagctactggtcttcagtcaattc
ctattaccactgaaattcatggagaggttagtgatgaaagtgagaagttggtctcttggg
agagaaatctttttcatatcaggtgagtctagtacggaggagcgggaatcatcgatggag
cagttcaacaattcacctgatgctagagtcttctttggctcgatcaaggcatgtggtgaa
ggaatttctctggtgggtgcatcacggattataattctggatgtgcacctcaatccttca
gttactcggcaagcaataggtcgtgcatttcgacctgggcagaagagaaaggtttatgca
tataggctggtcgctgccgattcccctgaagaggaagatcatgttacatgcttcaagaag
gaattgatttcgaaaatgtggtttgagtggaacgagtatcgtggttttcaggactttgat
gtggagactgtcgacacaaaggaatgtggcgatccttttcttgagaacccatttctccat
gaggatgtcaaagtcttgtacaaaaggtaa
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