KEGG   Rhodamnia argentea (silver malletwood): 115755073
Entry
115755073         CDS       T10595                                 
Name
(RefSeq) UBP1-associated protein 2C-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115755073
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rarg03019]
    115755073
   03041 Spliceosome [BR:rarg03041]
    115755073
Messenger RNA biogenesis [BR:rarg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     115755073
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115755073
Spliceosome [BR:rarg03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    115755073
SSDB
Motif
Pfam: RRM_1 RRM_7 NMB0537_N
Other DBs
NCBI-GeneID: 115755073
NCBI-ProteinID: XP_030550206
UniProt: A0A8B8QSM2
LinkDB
Position
2:complement(6837641..6842899)
AA seq 470 aa
MESFTVPFAVDLSKKRKLEENNGFAPPTEQSDTIPALAPVEARKMFEPFTREQLLDVLQD
AIINHPDVLYAARALADGDATQRKLFVRGLGWETTTEGLRSLFSVYGEIEEAVVVLDKAT
NKSKGYGFVTFKHVDGALRALREPSKKIDGRVAVTQLAAAGNAGSNVNPVDVSNRKIYVG
NVPIDMPSDKLLSHFSVYGEIEEGPLGFDKLTGKSRGFALFVYKTMEGAQAALVDPVKTI
DGRQLNCKLAIDGKKKPGAGPMGGHGASGGHGDRPVDGMGMGGVPSFQGSVPGQYGPNSV
GGYGGFSGQPSVGLMNSASMGGPSATSMSNQAPSLGGVGGFGAGLGGPYSGYGGHGSAGY
GGMGNALGGLGSAGGFGGVGGGLGGAAGGLAGVASGFGGAATGSSLYRPSGGYPEGGNYG
LSSSSAYPSQTQQPTGTSPVPRVPQGGMYPNVPFYSGYDSLLAQMLLSFW
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggagtctttcaccgtccctttcgcggtggacctctctaagaagcgcaagctcgaagag
aacaacgggttcgcgccgccgacggagcaatcggacaccatccccgcgctcgctcctgtc
gaggctcgcaagatgttcgagcccttcaccagagagcagctcctcgacgtccttcaggac
gccatcatcaaccaccccgatgtgctctatgcggcccgcgccctggcggacggcgacgcc
acgcagcggaagctattcgtccgcggcctcggatgggagaccaccaccgaggggctccgc
tcgctcttctctgtgtacggggagatcgaggaggccgttgtggtcctcgacaaggccacg
aataagagcaagggttatggtttcgtcacgtttaagcatgtggacggcgcgctccgtgct
ttgagggagccgagcaagaagattgatggccgggtcgcagttacccagctcgctgccgct
ggtaatgccgggtcgaatgtgaatcccgtggatgtttccaacaggaagatttatgtaggt
aatgtgccaattgatatgccctcggataagcttttgtctcatttttctgtgtatggtgag
attgaggagggcccactggggtttgataagctgactgggaagtcaaggggtttcgctctg
tttgtctataagacgatggaaggagcgcaggctgcgttggtggatccggtgaagacaatt
gacgggagacagttaaactgtaagttggcgatcgatgggaagaagaaacctggcgcggga
cctatgggaggtcatggtgcatctggtgggcatggggatcgcccagttgatggaatggga
atgggtggcgtaccttcctttcaggggtctgttccggggcagtatggtccgaattcagtt
ggaggttacggtgggttttcgggtcaaccatcggtgggtctgatgaattcagcttcaatg
ggcggccccagtgcgacttctatgagcaatcaggctccatccctgggcggtgtcggtggt
tttggtgctggactaggtggtccatatagtggttatggtgggcatgggtctgcaggctat
ggagggatgggtaatgctctgggcggacttggttctgctgggggttttggtggcgttggt
ggtggtttgggcggtgctgctggtggactggccggcgtggcttcaggttttggaggtgct
gccactggatcatctctgtatcggccttcaggtgggtatccagaaggggggaactatggg
ttgtcatcatcatctgcttatccaagtcagactcagcagccaacagggacctctcctgtg
ccaagggttccccaaggaggaatgtatccaaatgtgcctttttattcaggttatgacagc
ttgttggcgcagatgctattgtcattctggtga

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