KEGG   Rhodamnia argentea (silver malletwood): 115755888
Entry
115755888         CDS       T10595                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4-like protein
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115755888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rarg03036]
    115755888
   03400 DNA repair and recombination proteins [BR:rarg03400]
    115755888
Chromosome and associated proteins [BR:rarg03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    115755888
DNA repair and recombination proteins [BR:rarg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     115755888
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 115755888
NCBI-ProteinID: XP_048135831
UniProt: A0ABM3HGW8
LinkDB
Position
6:10924577..10931877
AA seq 541 aa
MEEKRKKRAEDGEEPVAVVSPYFQKKRASGQATEADLKQGGLPVSEKILEMISRFTYTAG
PMMKKKKEEVVPISRSDGEPKLSPYFKQKSDNDGVVGSAAGGSVGERKPDDEKPQSWAKA
RPSGGAKSGNGVKVSPYFPKANDESPLPQSEGTVRARAKGKEGVKIKVSPYFQKAEDEAP
PPQRKARAKKIRVPKKKADEEGEGTEAKTGNVIKVSPYFQKANDASPLSQSDGRARARGK
KAVKIKFSPYFQEAEDEVPQPQRNSRAKKIKVSKKKADEEGEGTEAKTGNVVKVSPYFQK
ANDASPLSQSDGRARARGNKAVQIKVSPYFQETEDEVPQPQRKARAKKIKVSKKKADEEG
HGKEVKPKRKRQPIDRRRVLTAAEKRAEAYRRKSPDNTWKPPPSVHRLLQESHWHDPWRV
LVICMLLNVTTGKQTSQYLDTLFKEYPDATKAAEASVETLEAIIQYLGLKSKRARMIMRM
SREYLDETWTHVTQLHGVGKYAADAYAIFCTGKWKEVNPLDHKLKDYWEYLWWLEDRRLL
K
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggaggagaagaggaagaagagagcagaggatggagaagagcccgtcgccgtcgtctct
ccatacttccagaagaagagagcaagcggtcaagcgacggaagctgatctcaaacaggga
ggccttcccgtcagcgagaagatcctggagatgatttcgcggttcacttacacggctggc
ccgatgatgaagaagaagaaggaggaggtggtgccaatttcacgctccgatggtgagccc
aagctctctccttacttcaagcagaagagcgacaacgacggcgtggttggcagtgcggct
ggtggtagcgttggagagagaaagcctgatgacgagaaaccacagtcgtgggccaaggcg
agaccaagtgggggagcgaagtcgggaaatggtgtaaaggtttctccctacttcccaaag
gccaatgacgagtcgccgctgccgcagagcgagggaacagtgagagcgagagcgaaaggg
aaggagggggttaagattaaggtttcgccgtacttccagaaggccgaagatgaggcgccg
cctccgcagcgcaaggcaagagcaaagaagattagggttccgaagaagaaggccgatgag
gaaggggaaggcacggaagcgaagacgggaaatgttataaaggtctctccctacttccaa
aaggccaatgacgcgtcgccactgtcgcagagcgacgggagagcgagagcgagagggaag
aaggctgttaagattaagttttcgccgtacttccaggaggccgaagatgaggtgccccag
cctcagcgcaattcaagagcaaagaagattaaggtttcgaagaagaaggccgatgaggaa
ggggaaggcacggaagcgaagacgggaaatgttgtaaaggtctctccctacttccaaaag
gccaatgacgcgtcgccactgtcgcagagcgacgggagagcgagagcgagagggaataag
gctgttcagattaaggtttcgccgtacttccaggagaccgaagatgaggtgccccagcct
cagcgcaaggcaagagcaaagaagattaaggtctcaaagaagaaggccgatgaggaaggg
catggcaaggaagtgaagccgaagaggaagaggcagccgattgacaggaggagggtgttg
actgcggccgagaagagagcggaggcatacaggaggaagagccctgataacacgtggaag
ccgccgccctccgtccaccgtctcctgcaagagagccattggcatgatccttggcgtgtt
ctcgtcatctgtatgcttctcaatgtcactactggcaaacagacgagtcagtacttagat
actctgttcaaggaatatcctgatgccacaaaggcagcggaggcttctgtagaaactcta
gaggctattattcagtacctgggtttaaaaagcaagagggctagaatgataatgcgaatg
tcacgtgaataccttgatgagacctggactcatgtgactcagctacatggtgttggcaag
tatgccgccgatgcatatgcgattttctgtacaggaaagtggaaagaagtgaatcctctg
gatcataaacttaaggattactgggaatatttatggtggctcgaggatagaagactactg
aaatag

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