Rhodamnia argentea (silver malletwood): 115756425
Help
Entry
115756425 CDS
T10595
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115756425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115756425
03110 Chaperones and folding catalysts [BR:
rarg03110
]
115756425
03029 Mitochondrial biogenesis [BR:
rarg03029
]
115756425
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rarg04147
]
115756425
Enzymes [BR:
rarg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
115756425
Messenger RNA biogenesis [BR:
rarg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
115756425
Chaperones and folding catalysts [BR:
rarg03110
]
Heat shock proteins
HSP60 / Chaperonin
115756425
Mitochondrial biogenesis [BR:
rarg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
115756425
Exosome [BR:
rarg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115756425
Exosomal proteins of other body fluids (saliva and urine)
115756425
Exosomal proteins of breast cancer cells
115756425
Exosomal proteins of colorectal cancer cells
115756425
Exosomal proteins of bladder cancer cells
115756425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
115756425
NCBI-ProteinID:
XP_030552056
UniProt:
A0A8B8QXW2
LinkDB
All DBs
Position
6:complement(29666800..29670217)
Genome browser
AA seq
582 aa
AA seq
DB search
MASANAISTASILCSAKQGSLRRKGNQKVNFGQSSRKFAVRAAAKEIAFDQSSRAALQSG
IDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREVASK
TNDSAGDGTTTASVLAREIIQLGLLNVTSGANPVSVKRGIDKTVQGLIQELEKRARPVEG
RDDIKAVATISAGNDELIGAMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYT
SPQFVTNPEKLIVEFENARVLVTDQKISAIKDIVPLLEKTTQLRAPLVIIAEEVSGEALA
TLVVNKLRGILNVAAIKAPGFGERRKAILQDIAILTGAEYQASDLGLLVENTTVEQLGLA
RKVTISKDSTTIIADAASKDELQARVAQLKKELSETDSVYDLEKLAERIAKLSGGVAVIK
VGAATESELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTCVPAIKDKLEDADERL
GADIIQKALLAPASLIAQNAGIEGEVVVEKVKAREWEIGYNAMTDKYENLVEAGVIDPAK
VARCALQNAASVAGMVLTTQAIVVEKAKPKAPAVAAPQGLTV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctaacgctatctctactgcttccatcctctgctccgccaagcaggggagc
ttgaggaggaaagggaaccagaaggtgaatttcggccagtccagtagaaagttcgcggtg
agagctgccgccaaggaaatagcattcgaccagagctccagggccgctcttcagtccggc
atcgacaagctcgcggatgctgttggcctcacgctcggtccgagggggagaaatgtcgtt
ttggatgaatttggcagtccgaaagttgtaaatgatggggtcacaattgcccgagcaatt
gagttacctgatgctatggaaaatgctggtgctgctctcattagggaggttgcaagcaaa
actaatgactccgctggtgatggtacaactactgcatcagtccttgctcgtgaaattatt
caattgggattgctgaacgttacatccggtgcaaatccagtttcggtgaagagaggcatt
gataaaactgtgcaaggattgatacaggagctggagaagagggctaggccagttgaagga
cgtgatgacattaaagccgtcgcaacaatttccgctggaaatgatgagctcattggggca
atgattgcggatgcaattgacaaggttggcccggatggtgttttgtccattgaatcgtcg
tcgtcatttgagacaaccgttgatgttgaggagggaatggagatagacagaggatacaca
tcccctcaattcgtcaccaaccccgagaagttgattgtggaatttgagaatgcaagagta
ttggtgacagatcaaaagatttcagcaataaaggatattgtcccgttgctggagaagaca
actcagctgagagcgcctttggtcataattgctgaagaagtgagtggtgaggctttggct
actcttgttgtgaacaagttgcggggcatccttaatgttgctgctatcaaagcccctgga
tttggtgaaaggagaaaggcaatcctacaagatattgcaatcttgacaggagctgaatat
caagccagtgatcttggtctgcttgttgagaacacaacggttgagcagcttgggctagct
agaaaagtaaccatctctaaggattccacaaccattattgctgatgcggcatcaaaggat
gaattacaagccagggttgcacaactgaaaaaagagttgtctgaaactgattctgtatac
gacttggagaaactcgccgagaggattgccaagctatccgggggagttgctgtgatcaag
gttggtgcagctactgagagtgagcttgaggataggaagctccgaattgaggatgccaag
aatgcaacttttgctgccatagaggaaggcatagtgcctggcggtggtgcggcattcgtc
cacctctccacttgtgtgcctgctatcaaggacaagcttgaggatgcggatgaaagattg
ggtgctgacatcattcaaaaggcacttctggcacctgcgtcattgatagctcagaatgct
ggaatcgagggagaggtggtggtggagaaggtgaaggcccgcgagtgggagatcgggtac
aatgcgatgacagataagtatgagaacctggtagaggctggggtgattgatccggcaaag
gtggcgagatgtgctttgcagaatgcagcttcggtcgccgggatggtattgacaacccaa
gcaattgttgttgaaaaggccaagcccaaggctcctgctgttgctgcaccccaaggcctt
actgtatga
DBGET
integrated database retrieval system
