Rhodamnia argentea (silver malletwood): 115756640
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Entry
115756640 CDS
T10595
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X2
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
Enzymes [BR:
rarg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115756640
Spliceosome [BR:
rarg03041
]
Complex C
Other components
Complex C specific factors
115756640
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NCBI-GeneID:
115756640
NCBI-ProteinID:
XP_030552361
UniProt:
A0A8B8QYS2
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Position
3:11116450..11132629
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AA seq
695 aa
AA seq
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MSQFWKPGTEKPRLIDDEEGGVLFLTASASSSSSGYGFASIEKQRQRLPVYKYRTAILYL
VETHATTIVVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGV
KLGEEVGYTIRFEDATSTGTLIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDI
LLGLLKKIQRRRPELRLIISSATIEAKSMSAFFQTRRRRGLQDAEPALAMEPAILSVEGR
GFNVQIHYVEDPVSDYIQAAVSTVLLIHDKEPFGDILVFLTGQEDIEAAVKLLTEEARDN
RKSSSGLIVLPLYSGLSRAEQELIFSPTPRGKRKVVISTNIAETSLTLEGVVYVIDSGFS
KQRFYNPVSDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVNEMATEGIPEI
QRSNLVSCVIQLKALGIDNILGFDWPASPSPESMIRALEVLYSLGVLDDDAKLTAPLGFQ
VAEIPLDPMISKMILSSNQLGCSEEVLTIAAVLSIQSIWVSSRGIQKELDEAELRFAAAE
GDLVTFLNVYKGFLQSGKSSQWCHKNYINYHAMKKVVDIREQLRRIAQRLGVTLKSCDKD
MQVVRKAVTTGFFANACRLEPFTHNGMYKTVRTSQEVYIHPSSVLFRVNPKWIVYHSIVS
TDRQYMRNVATIEPSWLREVAPHFYRQDGPDPMLH
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaattctggaagccggggactgagaagcctcgactaattgacgacgaagaaggc
ggcgtcctcttcctcacggcttctgcttcttcgtcctcctccggatatgggtttgctagt
atcgagaagcagcggcaaaggcttcctgtgtacaagtacaggaccgccattctttatttg
gtggagactcacgcgaccaccatcgtagttggtgaaacgggtagtggcaaaaccactcag
attccacagtacctcaaagaagcaggttgggccgatggtgggcgtgtaatagcttgcaca
cagccaagacgactggctgtccaggccgttgcgtcaagagttgctgaagaaatgggagtc
aagcttggagaggaagttgggtacacaatacggtttgaagatgctaccagtacaggaacc
ctgatcaagtttctcacagatggggtgctactcagggaaatgatggatgatccacttttg
actaaatatagtgtcataatggtagatgaggcccatgaaaggtctatttcaactgatatt
ctacttggtcttctgaagaagattcaacgacgtagacctgagttgcggttgatcatatcc
tcggctactattgaagctaaatctatgtctgctttcttccaaaccagaaggcgtcgagga
ctacaagatgcggaacctgcattggcaatggaacctgcaattctctcggttgagggtaga
ggttttaatgtgcaaattcattatgttgaggatcccgtgtcggactatatccaggctgct
gtttcaacagtgttgttgattcatgacaaggagccatttggtgacattttggtctttctc
actggtcaagaagatattgaagctgctgttaagttgcttacagaagaagctcgagataac
agaaaaagttcttccggattgattgttttgcctttgtactcgggactttcacgcgcagaa
caggagttaatattttctcccactcctcgggggaagagaaaagtagtgatatcaacaaat
atagcggagacatcattgactttggagggtgttgtttatgtcattgacagtgggttctct
aaacaaaggttttataatccggtctcagacattgaaaaccttgtagtggcaccaatatct
aaagcatctgccaggcaaagggctggcagggctggaagagttagacctgggaagtgttat
aggttatacacagaagagtattttgtcaatgaaatggctactgaggggatcccagagata
caaagatcaaatctcgtttcttgtgtgattcagttgaaagccctcgggatagataatatc
ttgggcttcgactggccggcatctccatcccctgagtcaatgattcgtgctcttgaagtg
ctatactctcttggcgtactcgatgacgacgccaaacttacagcacctcttggttttcaa
gtagccgagattccacttgacccaatgatctcaaagatgatcttgtcttcaaaccagctg
ggttgttctgaggaggtcctcacgattgctgcggttctttctatccaatctatttgggtt
tccagtaggggaatacaaaaggaactggatgaagcagagttgagatttgctgctgctgag
ggtgatcttgtaacattcttaaacgtgtacaaaggatttcttcagtctggcaaatcatcg
cagtggtgtcataagaactacattaattatcatgcaatgaagaaggtggttgatatcaga
gaacaattaagaagaatagctcagagattgggagtaactctaaaatcttgcgacaaagat
atgcaggttgttagaaaggccgtcacgacagggttcttcgcgaatgcttgtcgtcttgag
ccatttactcataatgggatgtacaagaccgtgagaacgtcccaggaagtttacattcac
ccgtcctcggttttatttcgagtaaatccgaagtggattgtctaccactcgattgtctcg
actgaccgacaatacatgcgcaatgttgcaaccatcgaaccatcgtggttgagagaagtt
gcaccacatttctacaggcaggatggacctgatcctatgttgcattga
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