Rhodamnia argentea (silver malletwood): 115757502
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Entry
115757502 CDS
T10595
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rarg03036
]
115757502
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
115757502
REST complex
115757502
Heterochromatin formation proteins
Other heterochromatin formation proteins
115757502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
115757502
NCBI-ProteinID:
XP_030553614
UniProt:
A0A8B8R2A7
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All DBs
Position
11:16899760..16909798
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AA seq
1382 aa
AA seq
DB search
MKRIRDDVYPDSQFKRPFGSSKGELYGQSQVPAVGMGGGGGVSASQKLTTDDALTYLKEV
KDMFQDQREKYDMFLEVMKDFKAQRTDTVGVIARVKELFKGHNNLILGFNTFLPKGYEIT
LDEDEAPTKRTVEFEEAISFVNKIKKRFQNDEHVYKSFLEILNMYRKEHKDINEVYSEVA
SLFEDHADLLEEFTRFLPDNSATPLAHNIPYSQNSLQHYNERNMATPAMRQMHSDKQCHR
RDRIIASDADRDLSVDRPDVEDEKSMIKVHRDQKKRLERDNRDRINREQDDRESGHDNKD
LHLQRSSDKRKSSRKVEGFGMNANVPFADDKNALKSMYNEGFIFCEKVKERLGSSDDYQA
FLKCLHMYSNGIIKRIDLQNLVTDLLGKFPDLMDEFNDFLERCENIDGFLAGVMSKKSLS
CDSRVPRSVKAEDRDKEQKREPEGTKDKERHKEKYMWKSIQELDLSDCQRCTPSYRLLPE
DYPIPSASQRSEVGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLL
ESVSSTSKRAEELLNNISDNIHNMETSIHVENYFTALNLRCIERLYGDHGLDVLEILRKN
PTLALPVILIRLKQKQEEWTKCRSDFNKVWADIYAKNHYKSLDHRSFYFKQQDSKNLSTK
SLVAEIREMKEKRQKEDDSILAIAAANRQPIVPHFEYLFSDGSIHEDLHKLVKYSCEEVC
STKEQLNKVMRLWTTFLEPMLSIPCRSHKKGSAEVVGKTISGARIVTSSKGVEINGSPEA
DGTRVDLKHPKPVDSRTENISSGASTSRINLPNGNMSIKENSCLDPEHARGDDSGHCVHF
PGKELKNADVTEEMSRLKIEAGSAEPATDDAKLANSENCFGRVKLPAMSGGDVPPCNSSN
GASEDRKVDVVPLLEAGTATKVAGSGLLEEGTKANRYNGNSFGSPKIEKEEGELSPVADY
EEDNSAANRDGGAKALPKANCHADDRENHPVGVEQACNRDGRRRNHADEEDSEDVSETGD
VSGSNSAGDECSHEENEEEEDVDHDDDGKAESEDEAEGTSDAPRNGDSASLPLSERFLSS
VKPLSKRVLAVLPAERKCSQIFYGNDDFYVLFRLHQILYERILSAKTNSINTDRRRISED
IGSPDPYARFMRILYNLLDGTIDNAKFEDECRDIIGNQSYVLFTLDKLIYKLVKQLQLVA
SDDMDNKLLQLFDYEKSRKSARFVDPVYYENARIFLHDENIYRIEFSFAAPSLSIQLMDN
PNEKPEVFAVCIDPNFAAYLHNDYLIASPIRKEPHDIFLSRNKRKYAGLDENSVFCMALE
GIHVVNGLECKVACNSSKTSYVLDTEDFLFRWRRRRKSSPGFRSSSRYQEKVQRFHRFLS
TK
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaataagggatgatgtctaccctgactctcaattcaaacggccctttggttct
tcaaagggggaattgtatgggcaatcccaagttcctgcagtcggaatgggaggaggagga
ggggttagtgcctctcagaaattgacaacagatgatgccttaacatatctcaaggaagtc
aaagacatgtttcaagatcaaagggagaagtatgacatgttcttggaggtcatgaaagat
ttcaaggctcaaagaactgatactgtaggtgtcatagctagagtaaaggaattgttcaag
gggcataacaatttaattttgggcttcaatacattcttaccgaaagggtatgaaataact
ttggatgaggatgaagctcctactaagaggacagttgagtttgaagaagctattagtttt
gtaaacaagataaagaaacgttttcaaaatgatgagcatgtttataaatcatttctagag
attttgaatatgtatcggaaggagcacaaggatataaatgaggtctacagcgaggtagct
tctctttttgaggaccatgcagacttgctggaggaattcacaagatttttacccgataat
tccgcaacacctttggcacataatatcccgtacagtcagaattcattacagcattataat
gagcggaatatggccacacctgcaatgcggcaaatgcatagtgacaagcaatgccatcgt
cgggataggattattgcttcagatgctgatcgtgatcttagtgttgatcgtcctgacgtg
gaagatgagaaatctatgataaaggtacatagggaccagaaaaagcgtctcgagagggat
aaccgagataggataaatcgtgaacaggatgatagagagtctggacatgataataaggat
ctccacttgcagaggtcttccgacaaaaggaaatcttccaggaaagttgaaggttttgga
atgaatgcgaatgtgccatttgctgatgacaaaaatgccttgaagagcatgtacaacgaa
gggtttattttctgtgaaaaggttaaggagcgattgggcagctcagatgattaccaggca
tttctgaagtgtctccacatgtatagcaatggaataattaaaagaattgacttgcaaaat
ttggtgactgatttgctggggaagtttccagatctcatggatgaattcaatgattttctg
gaacgctgtgaaaacattgatggctttctggccggtgtcatgagtaagaagtcgctctcg
tgtgatagtcgtgtacccagatcagtgaaggcagaggatagagataaagaacagaagcgt
gaacctgaaggaacaaaggacaaggaaagacataaggagaagtacatgtggaaatccatt
caagaacttgacctctctgattgtcaacgttgtactccgagctaccgtcttctgccagaa
gattatccaataccttctgcaagccagcgatcggaggttggtgcgcaagtactgaatgat
cactgggtgtcagtcacttcaggtagcgaggattactctttcaaacatatgcgaaggaat
cagtatgaagagagcttgttcagatgtgaagatgatagatttgaactggacatgctactg
gaatctgtaagctcaacttctaagcgtgcagaggagcttctgaataacattagcgacaac
atacacaatatggagacttctatccatgttgagaattattttactgctcttaacttaaga
tgcattgaacgtttatatggtgaccatggcctggatgtactggagatccttcggaaaaac
cccactcttgcattgcctgtcatactgattcgccttaaacagaagcaggaggagtggaca
aagtgtcgttcagattttaacaaggtttgggctgatatatatgccaaaaaccactacaaa
tcacttgatcaccgcagcttctacttcaaacagcaggattcaaagaacttgagcacaaaa
tctttggttgctgagatcagagaaatgaaagagaagaggcaaaaagaggatgatagtatt
ctcgccattgccgctgcaaataggcagcccattgtcccccattttgaatatttattctct
gatggtagcattcatgaagacttgcacaaacttgttaagtactcatgtgaagaggtttgc
tccaccaaagaacagttaaataaagttatgcggctatggactacatttctggagccaatg
ctgagtattccttgtaggtcccacaagaaaggtagtgctgaagttgttggcaaaaccatt
tctggtgctagaattgtcacttcatccaagggagttgaaattaatggaagtccagaggct
gacggtactagagtagatctaaagcatccaaagcctgtggacagtaggacagagaatatt
tcatccggggcaagtacttctaggataaatttgccaaatggaaacatgtcaatcaaagag
aacagttgcctagatccagagcatgcccgtggggatgattctggtcactgcgttcatttt
cctgggaaggaactaaagaatgcagatgtgactgaagaaatgtctaggttgaagatagaa
gctgggtctgccgaaccagccactgacgacgcgaagcttgcaaattcagaaaattgtttt
ggacgagttaaattgccagcaatgtcagggggtgatgtgccaccatgtaattctagcaat
ggtgcaagtgaggaccgaaaggttgatgttgttcccttactggaggctggtactgctaca
aaagttgctgggagtggattgcttgaggaaggcacaaaagccaacagatacaatggaaat
tcatttgggtcccctaaaattgaaaaagaagaaggtgaattatctccagttgctgactac
gaggaagacaactctgctgccaatagagatggtggagcgaaggctctgcctaaggcgaat
tgccatgcagatgacagagagaaccaccctgttggtgtggaacaggcatgtaaccgggat
ggtaggagaagaaatcatgctgatgaggaagacagtgaagatgtttctgaaacaggtgat
gtatcgggtagcaattctgcgggtgatgagtgctctcatgaagagaatgaagaggaggaa
gatgtggaccatgatgatgatggtaaggctgagagtgaggatgaggcagagggtacatct
gatgcgcctcgcaatggagactctgcttcgttgccactgtcagaacgtttcctttcttca
gtgaagcccctttcaaagcgtgtgctggctgttctacctgcggagaggaagtgttcccag
attttctatggaaatgatgatttctatgtgctttttaggcttcatcaaattctctacgaa
agaattttatcagcaaagacgaactcaataaacactgatagacgcagaatttcggaggat
atcggttctccagatccatatgccaggtttatgaggatcctgtacaacctgcttgatggg
accattgataatgcaaaatttgaggacgaatgcagagacataattggaaatcagtcttat
gtgctctttacattggacaagttgatatataagctcgtgaagcagcttcaattagttgct
tctgatgatatggacaataagcttcttcaattgtttgattacgagaaatcaaggaaaagt
gcgaggtttgttgatccagtgtattatgagaatgcacgcatcttcctccatgatgagaac
atatacagaattgaattttcatttgctgctccttctttgtccattcagctgatggacaat
ccaaatgaaaaaccggaagtgtttgcggtttgcatagaccctaattttgctgcttatctg
cacaatgattatctgatagcctctcctatcagaaaggagccacatgacatatttctttca
aggaacaaacgtaaatatgctggcctggatgaaaattctgtattctgtatggccttggag
ggcattcatgtcgttaatggtctggaatgcaaagtggcttgcaactcatcgaagacctca
tatgtcctggacactgaagatttccttttccggtggagaaggagaaggaaaagctcgccc
gggtttcgatcttcatctcgttaccaagaaaaggtacaaaggttccacagatttttgtcg
acaaagtag
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