Rhodamnia argentea (silver malletwood): 125314256
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Entry
125314256 CDS
T10595
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125314256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rarg03009
]
125314256
Ribosome biogenesis [BR:
rarg03009
]
Eukaryotic type
Pre-60S particles
GTPases
125314256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
EFG_III
GTP_EFTU_D2
SRPRB
Beta-prop_Nup120_160
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
125314256
NCBI-ProteinID:
XP_048132116
LinkDB
All DBs
Position
3:16821234..16824668
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AA seq
1030 aa
AA seq
DB search
MGDSDDARKVRNICILAHVDHGKTTLADHLIASCGGGLLHPKLAGKLRFMDYLDEEQRRA
ITMKSSSIALNYKDYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVL
RQAWIEKLTPCLVLNKIDRLICELKLSPVEAYNRLLRIVHEVNGIVSAYKSEKYLSDVDS
MLAGSMGGEVDDENLQLIEDDEEDTFQPQKGNVAFVCALDGWGFTINEFAEFYASKLGAS
AAALQKALWGPRYYNHKTKMIVSKKALGGGSNKAKPMFVQFVLEPLWKVYQAALEPNGEK
ETLEKLIKSFNLSIPPRELQSKDPKVMLQAIMSRWLPLSDAILSMVVRCMPDPIAAQSFR
VSRLLPKREVLDSGVDLDVLAEAEIVRRSVESCNGSPDAPCVAFVSKMFAVPVKMLPQRG
PQGEVLNSSNDEGPGGESDECFLAFARIFSGEFSSGQRVFVLSALYDPLKGESMQKHVQV
AHLHSLYLMMGQGLKPVSSAKAGNIVAIRGLGQHILKSATLSSTLNCWPFSSMAFQVAPT
LRVAIEPSDPADMGALMRGLRLLNRADPFVEVSVSVRGEHVLSAAGEVHLERCIKDLKER
FAKVRLEVSPPLVSYKETIEGDLSNPLENLKSLSKGSDYVEKTTPNGRCNISVQVMKLPP
ALTKVLDESADLLGDVIGGKQGPSSKILETQQSGTKEEENPTEALKKRIIDAIDSEISSA
AVNDEDRADKCRAKWLKFLRRIWSLGPRHVGPNILFTPDSKKMISDEAVLVRGSAYVSER
LGFLDTADCDDIAAQQFVESNQGLYDEAKSLESGIISGFQLATSSGPLCDEPMWGLAFAV
EAYISPLAGKSDEPENNQQPEQHGIFTGQVMAAVKDACRAAVLRNKPRLVEAMYFCELNT
PTEHLGSLYAVLGRRRAHVLKEEMQEGSSLFTVHAYVPVAESFGFADELRRWTGGAASAL
LVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHA
TKQRTLARKV
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattctgatgatgccaggaaggttcggaatatatgcatactcgctcatgtcgat
catggcaagaccaccctcgccgaccatttgatcgcgtcctgtggcggcggattgctccac
ccgaaactcgcaggtaagcttcggtttatggattatttagacgaggaacagaggcgtgct
attacgatgaagagctcttcgattgctctcaactacaaggactattcgattaatctcata
gactcccctggccacatggacttctgtagcgaagtgtcgactgccgcacgattgagcgat
ggggcgttagtgttggttgatgcagtagagggcgtccatattcaaacccatgccgtgttg
cgccaagcttggatcgaaaagctcactccatgcttggtgctcaacaaaattgataggttg
atttgtgagctgaagttgagccccgtggaggcttataacaggttgttgaggatagtccac
gaggttaacgggattgtgagcgcttataagtcagagaagtacttgtcagacgtggactcg
atgctcgcaggttctatgggcggtgaggtcgatgacgagaatctgcagttgatcgaagat
gatgaggaggatacctttcaaccccagaaagggaatgtggcatttgtgtgtgcattagat
gggtggggatttactattaacgagtttgctgagttttatgcttcaaagctcggagccagt
gcagctgcgctgcagaaagcactttggggtccgaggtactacaaccacaaaacgaagatg
atagtcagtaagaaggctctaggtggtggaagcaataaggctaaacccatgtttgtccag
tttgtgctggagccactttggaaggtttaccaggcagcgctagaacctaatggggagaaa
gagacgcttgagaagctcatcaaatcgtttaatttatccataccacctcgggagctccag
agtaaggatccgaaagtaatgctgcaagctataatgagtcgctggcttcctctttctgat
gcaattttatccatggttgttaggtgtatgccggatccaattgccgcgcaatcatttcgc
gtctcacgattgcttccaaagagagaagttttagatagcggagttgacttagacgtgctt
gcagaggcagagattgttagaagatctgttgagagttgtaatggtagtcccgacgcacca
tgtgttgcttttgtatccaagatgtttgctgtcccggtgaaaatgctacctcaaagaggt
ccacaaggggaggtgttgaacagttcaaatgatgaaggtccaggtggagaatcagatgag
tgctttcttgcatttgctaggatttttagcggggagttttcttcggggcagagagttttt
gtgctttcggctttgtatgatcccctcaagggagaatccatgcaaaagcatgtgcaggta
gctcacttgcattccttgtacttgatgatgggtcaaggcttaaaacccgtttcttctgca
aaggctgggaatattgtagccatccgtggccttggtcagcatatattgaaaagtgcgact
ctttcatccactctgaactgttggcctttctcaagcatggctttccaagttgctccaacc
ctccgggtggcaattgagccgtcagacccagcggatatgggtgcccttatgagaggattg
aggcttctgaaccgagcagacccatttgtggaagtcagtgtttctgttagaggtgaacat
gtgctttctgctgcaggagaggttcatctagagagatgcataaaggatttgaaggagagg
ttcgctaaggtaagattagaagtctcaccacccctcgtttcctataaagagactattgag
ggtgatctatccaatccattagaaaacctgaagtcgctatctaagggctcagattatgtt
gagaagactacgccaaatggacggtgtaatatctcagtgcaagtcatgaaactgccacct
gcactaactaaggtgcttgacgagagtgctgacctccttggggatgttataggtggtaag
caaggaccgagcagtaaaatattggaaacacagcaatcaggaacgaaggaagaggaaaat
ccaactgaagcacttaagaaacgtataatagatgcgatagatagtgagatcagctcagca
gctgtgaatgacgaggatcgtgctgataaatgtagagcaaagtggctcaagttccttagg
aggatttggtcacttgggcctaggcatgttggtccaaatatactcttcactccagactcc
aagaaaatgatttctgatgaagctgttctcgttcgagggtcggcctatgtatctgagaga
ttaggctttctggatactgctgattgtgatgatatagctgcacagcaatttgtagaatcc
aatcaaggattgtatgatgaagcaaagagtcttgagagtggcattatatctggctttcaa
ctggctacatcatctggccccttgtgtgatgaaccaatgtggggcttagcttttgctgtt
gaggcctatatttctcctttggcgggaaaatctgatgaacctgaaaataatcaacagcct
gagcagcatggcatcttcactgggcaagttatggcggcagtcaaagatgcctgtagagca
gcagttctccggaataaaccccgacttgtggaagccatgtatttctgcgagttaaacact
ccgactgaacacttgggatcactgtatgctgttttgggtaggagaagggctcatgttctg
aaggaggaaatgcaggaagggtcatcgttattcacggtccacgcatatgttccggttgct
gaaagctttggtttcgcagatgagctaaggagatggacaggtggagctgccagtgctctg
cttgtacttagtcactgggaagcgcttcctgaggatcctttctttgtgcccaaaactgaa
gaggaaattgaggagtttggagatggctctagcgtgcttccgaatacagcgagaaagctg
atcgatgccgtgaggcggcggaaaggccttcctgtggaggaaaaggttgttcagcatgca
acgaagcagaggaccctggctcgaaaagtgtag
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integrated database retrieval system
