Rhodamnia argentea (silver malletwood): 125314328
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Entry
125314328 CDS
T10595
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03420
Nucleotide excision repair
rarg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125314328
09124 Replication and repair
03420 Nucleotide excision repair
125314328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rarg04121
]
125314328
03400 DNA repair and recombination proteins [BR:
rarg03400
]
125314328
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rarg04147
]
125314328
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
125314328
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
125314328
TCR (transcription coupled repair) factors
Cul4-CSA complex
125314328
Exosome [BR:
rarg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125314328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Tuberculin
Motif
Other DBs
NCBI-GeneID:
125314328
NCBI-ProteinID:
XP_048132298
LinkDB
All DBs
Position
3:12894086..12907325
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AA seq
840 aa
AA seq
DB search
MSHPTKRFATSASTTGPSSSSSSSSGDGAAAPSAFASPPMKKAKSQAVAGSLDSTAAHKN
GLHPHPAKQQSQQPGFDPEGDVVFDPTTLSLEDGMKSDDMAAGHSVAANLSRKKATPPQP
PKKLIIKLVKAKPTLPTNFEEDTWAKLKAAINAIFLKQPVSCSLEDYYQAVNDLCLHKLG
GNLYQRIEKECETHISAVLQTLVGQSPDLAVFLSLVERCWQDFCDQMLMIRGIALYLDRT
YVKQNPNVRSLWDMGLQLFRKHLHLSAEVEHKTVTGLLRMIEKERLGEAVDRTLLNHLLK
MFTALGIYAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYMKHVEVRLHEEHERCLLYLD
ASTRKPLIATAERQLLERHIHAILDKGFMMLMDGNRIEDLQRMYQLFARVNALESLRQAL
SLYIRQTGQGIVMDEEKDKDMVPSLLESKVSLDAIWEESFSKNEMFCNTVKDSFEHLINL
RQNRPAELIAKFLDDKLRAGNKGTSEEELESILDKVLVLFRFIQGKDVFEAFYKKDLAKR
LLLGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPS
GIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQSSLGHCVLK
ADFPKGRKELAVSLFQTVVLMLFNDAQKLSLQDIRDSTGIEDKELRRTLQSLACGKVRVL
QKVPKGRDVEDDDSFEFNETFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAA
IVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccccaccaaacgctttgccaccagcgcgtccaccaccggtccctcctcctcc
tcctcttcctcctccggcgacggcgccgccgccccttctgccttcgcttctccgcccatg
aagaaagccaagtcccaggccgtcgccggctctctcgactccactgccgcccacaagaac
ggcctccacccacatcccgccaagcaacagtcgcagcagccgggattcgatcctgagggc
gatgtcgtctttgatcctacgaccctgtcccttgaggacggcatgaagtcggacgacatg
gcggcggggcacagcgtcgccgccaatttgtcccgaaagaaggccacgcctccgcagcct
cccaagaagctcattatcaagcttgtaaaagctaagccgacacttcccacgaattttgaa
gaggatacatgggcaaagcttaaagcagctataaatgcaatattcttaaagcaacctgtt
tcctgtagtttggaggattattaccaggctgtcaacgacctctgcctacacaaattgggg
ggaaatctttatcaacgcattgagaaagagtgtgaaacacatatatcagcggtgctgcag
actctcgtcggccagagcccagatttggcagttttcttatcacttgttgagagatgctgg
caggatttctgtgaccagatgctgatgattcgtggcatagccttatatttggatagaacc
tacgtgaaacaaaacccaaatgttcggtcattatgggacatgggattgcaacttttccga
aagcatcttcatttgtcagcagaagttgagcataaaactgtcaccggtctcttaagaatg
attgaaaaggaaaggttgggtgaagcagttgataggacactacttaatcatcttctgaag
atgtttactgctctaggaatttatgcagaaagttttgagaagccattccttgagtgcacg
tccgaattttatgcggctgaaggcatgaagtacatgcagcagtcagatgttccagactac
atgaaacatgtggaggttagattgcatgaagaacatgagaggtgtttgctctacctcgat
gctagtacaaggaagcctctaattgctactgcagaaaggcaacttctggaacgacatata
catgctattctcgataagggattcatgatgctgatggatggaaatcgtattgaggacctt
cagagaatgtaccaattgtttgcaagggtaaacgctttggagtcattgagacaagcactt
agcttgtatatacgacagactggtcagggtattgtcatggatgaagaaaaagataaggac
atggtgccatcccttttggagtctaaggtttctttagatgcaatatgggaagaaagtttt
tcgaagaatgaaatgttttgcaacactgtcaaggattcatttgagcacctaatcaatctt
cgtcagaaccgaccagctgagttaattgcaaagtttcttgatgataagttgcgcgctggt
aataaaggaacctcagaagaggaattggagagtatacttgataaagttctggttttgttt
aggttcatccagggaaaggatgtgtttgaagcattctacaagaaggatctcgcgaagaga
ctgttattggggaagagtgcttccattgatgcagaaaaatccatgatcacaaagctgaag
accgagtgtggtagtcagttcacaaataaacttgaaggaatgttcaaggacattgaatta
tcgaaagagataaatgaatcattcaagcaatcatcacaagcaaggacaaaactaccgtca
ggaattgagatgagcgtccatgtgctgactacagggtactggcccacttatccacccatg
gatgtaaggctccctcatgaattgaatgtttatcaggacatatttaaggagttttacctt
agcaagtatagtgggagacgtctaatgtggcaaagttcattaggtcactgtgttctgaag
gcagattttccgaaagggagaaaagagctggcagtttccctatttcagacagttgttctg
atgctatttaacgatgctcagaagcttagtttgcaagatataagagactccacaggcatt
gaggataaggagctgagaagaactctgcaatcccttgcatgtggaaaagtgagggtcctt
caaaaggtgcccaagggcagggatgtggaggatgatgattctttcgagttcaatgaaact
tttagtgctcctctctatcgaataaaggttaatgctatccagatgaaggaaacagtggag
gagaacacaagtaccaccgaaagagtgtttcaggaccgtcaatatcaggtcgatgctgct
attgttcggataatgaagacaaggaaagtgcttagccacacacttttgataactgaactg
tttcagcagctcaaattccctatcaagccagctgatctgaagaaaaggattgaaagcctg
attgacagagaatacctggagcgggacaagaacaaccctcagatatacaattacttggct
tag
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