Rhodamnia argentea (silver malletwood): 125315680
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Entry
125315680 CDS
T10595
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125315680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rarg02000
]
125315680
04147 Exosome [BR:
rarg04147
]
125315680
04090 CD molecules [BR:
rarg04090
]
125315680
Enzymes [BR:
rarg01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125315680
Transporters [BR:
rarg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125315680
Exosome [BR:
rarg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125315680
CD molecules [BR:
rarg04090
]
Proteins
125315680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
AAA_21
RsgA_GTPase
DUF87
Zeta_toxin
AAA_30
AAA_15
SbcC_Walker_B
DLIC
nSTAND1
AAA_7
DUF815
Motif
Other DBs
NCBI-GeneID:
125315680
NCBI-ProteinID:
XP_048137538
LinkDB
All DBs
Position
6:complement(20971684..20978281)
Genome browser
AA seq
1302 aa
AA seq
DB search
MANEKDGDEHSRMGLIDDHTSPSRALETAKHASSGSKDKEDRLTGVPFYKLFSFADPVDY
VLMLAGSIAAVGSGISMPLMTLLFGQLVNSFSETGNTKEVANAVSKVCLKFVYLAVGSGV
VAFAQVACWMVTGERQAARIRGLYLKALLRQEIGFFDKETNTGEIIGRMSGDTVLIQDAM
GEKVGKFIQQIAIFFGSFVIAFIKGWLLTLVMLSSMPLLIFSGAALSRTVGKLASRGQTS
YSQAAAVVEQTVGSIRTVASFTGEKQAIAMYKESMTKAYESGVHEGLVLGMVSGTLTFIV
FRTYGLAIWFGGKMILENGYTGGDIVNVVVSVLTGSMALGQASPCMSAFAAGQAAALKLF
EAINRKPRIDAYNPSGRTLEGIRGDIELTDVYFSYPSRPDEQIFSGFSLSIPSGTITALV
GESGSGKSTVISLIERFYDPDAGEVLIDGINLKELQLRWIRQKIGLVSQEPVLFTSSIGE
NIAYGKEGAAAEEIRAAAELANATEFIDKLPQGMDTMVGEHGTQLSGGQKQRVAIARAIL
KDPRILLLDEATSALDAESERTVQEALDRIMADRTTVIVAHRLSTIRNANTIAVIHRGKI
VERGSHSELVNDGNGAYSQLIRLQEMAFVSEQKETINLGEQEIAVDSWRNSSRRMSFQRS
NSHGSSTGSTSHRSSSVAFGLPAAGVGILEMESDKPANNSCSATTKSPRDVSLRRVAYLN
KPEIPVLVLGTLAAAANGAIFPIFSILISGVIKAFSEPPHELRKGTKFWALIFLALGSAS
LLVYLMRSYFFTVAGCKLIARVRTMCFEKVVRMEISWFDEVEHSSGAVGARLSTDAAALK
ILVGGALGLIVQNIATAIAGFAIAFATNWQLALIILSLFPFFGINGYVQMKFMAGFSADA
KKMYEEASQVANDAVGSIRTVASFCAEERVMDLYRRKCEGPTKKGIRQGLISGIGFGSAL
FFLYALYSCGFYAGARLVEQGKMTFSEVFRVFFALGLASVGIAQSSSTFTDATKAKSSAA
SIFKILDRKSNIDPGDDSGIMIENLKGDIEFDHVSFSYPTRTNVQIFQDLCLAIPSSKTV
ALVGESGSGKSTVISLLQRFYDPDAGNIMLDRIEIRKLQLKWFRHQMGLVSQEPVLFNDT
IRANIAYGKEGIATEAEIIAAAELANANGFISSLQQGYDTIVGERGIQLSGGQKQRVAIA
RAIVKAPKVLLLDEATSALDAESERVVQDALDLVVVNRTTIVVAHRLSTIKGADMIAVVK
NGVIAEKGKHEDLIKIKDGMYASLVALHSSTSSKLHEKVLAL
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgagaaagacggagatgaacactcacgaatggggctaatagatgatcacaca
agtccatcccgggcgctcgagacagcaaaacatgcttcaagtggttccaaggataaagag
gatcgcttaactggcgtacctttttacaaacttttctcgttcgcagatccagtggactat
gttctgatgctcgccggttctattgctgcggttgggagtggcatcagcatgcccctcatg
actctattatttggacaactggtcaactctttcagcgaaactggaaataccaaagaagtg
gcaaatgcagtttccaaggtttgtctgaagtttgtatacttggctgttggatccggtgtt
gtggcttttgcacaggtcgcttgttggatggtcactggagagagacaagctgcaaggata
agaggcttatacttgaaggcattgttgaggcaggaaattggcttctttgacaaggaaaca
aatacaggcgaaatcattggaaggatgtcgggcgacactgttcttatccaagacgccatg
ggggagaaggtgggaaagttcatacagcaaattgccatattcttcggaagctttgttatc
gccttcatcaaagggtggcttctcacgctagtcatgttatcttcaatgcctctcctcata
ttttccggtgccgctttaagcagaactgttggaaagctggcttctcgtggacaaacctca
tattcacaagcagcagctgttgtagagcaaacagtcggatcgataagaactgtcgcgtcg
tttacgggagagaagcaagctattgctatgtacaaagaatctatgactaaagcctatgaa
tctggggtgcacgagggcttggttttagggatggtatctggtacacttacgttcatcgtg
tttcgcacttatgggttggcgatttggttcggtgggaagatgatcctggagaatgggtac
acagggggggacattgttaatgttgttgtcagcgtattgactggatcaatggctctagga
caggcatctccatgcatgagtgcatttgctgcgggacaagctgcggcactcaagctgttc
gaggctatcaacaggaagccacggatagatgcttacaatccttcgggacgaacactagag
ggcattcgtggcgatatcgaactgacggatgtgtatttcagttacccttctaggccagat
gaacaaatatttagtggattctctctttccatacctagtggtacgattactgctttggtt
ggagagagtggaagtgggaaatcaactgttatcagcttgattgagaggttttatgatccg
gacgccggagaagttcttatcgatggcatcaatctcaaagagcttcagctcagatggatt
agacaaaagatcgggcttgtcagtcaagagccggtgttatttacttctagcattggggaa
aatattgcgtatgggaaggaaggcgcggctgctgaagaaatcagagcagctgctgagctc
gcaaatgccactgaattcattgacaaactacctcagggaatggacacgatggttggcgag
cacggaactcagttgtctggaggacaaaagcaaagagttgcaatagctagagcgattcta
aaggacccgagaattttgcttctagacgaagctacaagtgccctggatgcagaatctgag
aggactgtgcaggaggcacttgataggatcatggccgatcggaccactgtcattgtagcc
caccgacttagcacaataagaaacgcaaatacaattgcagtgatacaccgtggaaaaatc
gttgagagaggttcacattctgagctggtcaacgatggcaatggagcatacagccagctt
atacgattgcaagaaatggcatttgtgtcagaacaaaaggagacgatcaatttgggtgag
caggaaatcgctgttgattcctggaggaattcaagtcgaaggatgtccttccagcgttca
aatagtcacggatcctcgactggaagtaccagtcaccgctcgtcttcagttgcatttggt
ttgcctgccgccggggttggcatcctggaaatggaatcagacaaaccagccaataattcg
tgctcggcaacaacgaaaagccctcgggatgtttctctccgacgagtggcttatctaaat
aagccagaaatcccagttttagtgctaggaactttagcagctgctgcaaacggagcaatt
tttcccatttttagcattctcatctctggtgtaatcaaagctttctccgagccaccccac
gagctccgcaaaggaacaaagttttgggctttgatattccttgctcttggttcggcgtcc
cttttggtctatctgatgagatcctactttttcactgtggccgggtgtaagttgatcgca
cgagtccggactatgtgctttgagaaagtggttcgcatggaaataagttggttcgatgaa
gtagagcattcaagcggtgccgtaggtgctaggctctctactgatgcggccgctttaaaa
attcttgtggggggtgcgctcggtctgattgttcagaatatcgcgacggccattgctggt
ttcgctattgcttttgcaacaaattggcagttggctttgataattctctccttgtttcct
ttctttggaatcaatggttacgttcaaatgaaattcatggcagggtttagcgcagacgcc
aagaaaatgtacgaggaagcgagtcaagttgccaatgatgcagtgggaagtatcagaaca
gttgcttctttctgtgctgaagaaagggtgatggatttgtaccggcgaaaatgtgaaggc
ccgacgaagaaaggaataaggcagggactaataagtgggataggattcgggtcggccttg
tttttcctttatgcactctattcgtgcggcttctacgccggagccaggctagtcgagcaa
ggcaagatgacgttctccgaagtttttcgcgttttctttgctcttggcttggcatcagtc
ggaatagcccagtcgagttctactttcacagatgccaccaaggcaaagagctcggctgct
tccatattcaagatcctcgacaggaaatccaatatagatcctggcgacgactcgggtata
atgatagaaaatctcaaaggagatatcgagtttgaccatgtcagttttagttatcccacc
aggaccaatgtccaaatattccaagatctttgcttggcaattccttccagcaagacagtt
gcgcttgttggagaaagcgggagcggaaaatcgacagttatctcgttgttgcagagattt
tatgaccctgatgcgggtaacattatgctcgaccgcattgaaatccggaaactgcagctg
aaatggtttaggcatcagatgggcctggtaagccaggagcccgtgttgtttaacgacact
attcgcgccaacattgcatacgggaaggaagggatcgcgacggaggccgaaatcatagct
gctgctgaattagccaatgcaaatgggtttattagcagcttacagcagggttacgacacg
atcgtaggcgagcgagggatacagctttctggtggacagaagcaaagggtggcaattgca
agagccatagtgaaggcgccgaaagtgttgctccttgatgaggcgacgagtgccctcgac
gccgaatcggaacgagtagtccaggacgctttggacctagtcgtggtgaacagaaccacc
attgtcgtagcccaccgcttgtccacgatcaagggagccgacatgatcgccgtggtgaaa
aacggagtcatcgcagaaaaggggaagcacgaagatctgatcaagataaaggatggcatg
tacgcttccctggtggcgctgcattcgagtacttcgtcgaaactacatgagaaagttctc
gctctttga
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integrated database retrieval system
