Rhodamnia argentea (silver malletwood): 125316378
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Entry
125316378 CDS
T10595
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
125316378
03036 Chromosome and associated proteins [BR:
rarg03036
]
125316378
Enzymes [BR:
rarg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
125316378
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125316378
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
125316378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
125316378
NCBI-ProteinID:
XP_048140544
UniProt:
A0ABM3HVA9
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Position
8:complement(27014545..27018589)
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AA seq
645 aa
AA seq
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MSRDPIRPKNEPNLTRTVGGSGLTHSSQVTSPFKAVALASPKPSPSVSKPSTATSSDPFV
SPAKPAAISAHSNQYVSKSSECSNEPSLSRLLHPSLSKASSPTPQVHQHSSPIPEPFKRV
QHPVFSDTKPPPISAHSNQNVAKPPRPSDQPSSSRVQSPSWSKTTSPTPKVQERSAKQYK
PVLRAVSPVSPDQQKETVYVQKDTSPLYNVPEDIEDLIKRDIVPGVLQKPLSPLTYRDYF
AALLYAEDVYIEKWTDFILEDVTLELHQLTIYKNVLDNDFAEEKTFVKFKMESVHGRRPF
LLSRDFVFAKPLDERDTQFQGFVHRVEKSSIILAEFGDDFHSQHHSRSRYNISFSFNRIC
LKRAHQAVEAATDPSFGNFLFPICATRRDLFALPSLFFSSDVLYSDQRSAIQQIVTLKGS
APFLLEGPLCTHSRGPLDLSKAGVVVREAVSQVYRRSKDPRILVAAPTNKTCDVLMRSLK
KDIPDSEIFRANAAFREHDGVPDDILPSCLYKKKSECFACPPLQELRKFKVIFSTFVSSF
RLHSEGINAGHFSHIFLVDASSTSEPEAMIVLANLANEDTTVIVTGAQGNRSGWVRSPIA
RKNGLRISYFERLKEFTPYKKLDPKFIARLDPEPESNETNSCLSY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagaccccatcaggcctaaaaatgagccaaatttgaccaggactgttggtggc
agtggcttaacccattcttctcaggtcacatctccgttcaaagcagtcgctttggcttct
ccgaaaccatccccttctgtatcaaagccgtcaaccgccacttctagcgatccgtttgtt
tccccggccaaaccggcggccatctcggctcactcgaatcagtatgtgtcgaagtcatct
gaatgttccaatgagccgtctttatctcgcttgctacatccttctctttcaaaagcgtcc
tcaccaactccacaagtgcaccaacattcttctccaattcctgaaccgtttaaacgggtc
caacatccagttttttcggacaccaaaccgccaccaatctccgctcactcgaatcagaat
gtagcaaaaccgcctcggccttccgatcagccatcttcatctcgtgtgcagtctccttct
tggtcgaaaacaacgtcgcctaccccgaaagtgcaagaacgctctgctaaacaatataag
ccagtcttacgtgcagtttccccagtttcgccggatcagcaaaaggagactgtttatgtt
cagaaagatacttcccctctttacaacgtccccgaggatattgaggatttgatcaagcga
gacattgtgccaggcgttcttcagaaaccactgtctcccttgacctatagggactatttt
gcagctcttctatatgcggaggacgtctacatcgagaaatggactgatttcattctggag
gatgtcactttggagctgcatcaattgactatttacaagaatgtattggacaatgatttc
gccgaggagaaaacttttgtcaaattcaagatggaatctgtacatgggcgtcgacccttc
cttctatcaagggattttgtttttgcaaagcccctcgatgagagagatacacagtttcag
ggttttgtacatcgagtggagaagagttctatcatcttagccgagtttggagatgatttt
cattcccagcatcattcaagaagcagatacaacatcagcttttctttcaatagaatttgc
ttgaagagagctcatcaagcagttgaagccgccactgatccttcctttggcaacttcctc
ttccccatatgcgcaaccagacgtgatttgtttgccttaccatctctttttttttcaagt
gacgtgctttactcggaccaaagatccgcaatccaacagattgtaactctcaaaggttca
gcaccgtttctcttggagggtcctctttgtacacacagtcgagggcctctagacctatca
aaggccggagttgtggttagggaagctgtgtcacaagtatatcgacgctctaaagatcct
cggattcttgtggctgcacctacaaacaaaacgtgcgatgttctgatgagaagcttgaag
aaggacatcccagattccgagatatttcgagcaaatgctgctttccgtgagcacgatggc
gtgcctgatgacattctcccttcgtgtctttataaaaagaagagcgagtgtttcgcttgt
ccacccctccaggaactccggaagttcaaggtaatattttcgacttttgtgagtagcttt
aggctacacagtgaaggcatcaacgcaggacactttagtcatattttcctcgttgatgca
tcgtccacttccgagccagaggcaatgattgtgctagctaatttggccaatgaagataca
actgttatagtcactggcgcgcagggaaatcgctcggggtgggtgcgatccccaattgct
aggaagaatggtctcaggatatcatactttgagaggctcaaagaattcacaccgtacaag
aagctcgaccctaaattcatcgcccggttggaccctgaaccggaatcaaatgaaactaac
agctgcctgtcatattga
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