Rhodamnia argentea (silver malletwood): 125316520
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Entry
125316520 CDS
T10595
Name
(RefSeq) uncharacterized protein LOC125316520 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125316520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
125316520
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125316520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
125316520
NCBI-ProteinID:
XP_048140938
UniProt:
A0ABM3HWF9
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Position
9:12107597..12111367
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AA seq
419 aa
AA seq
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MAVQEEDRPDIRDLPDEPWDWEEISRNLLYNIDQELGDERSPWGRKKHRLRWLGKPRAIP
QVILKLQDHNFRESALQLLSSFLFEKREEDPENYYRAGLLLFHSCGTMAILIQEVLLIYR
MMADGSLNERACMRLINVIILFQCIAANRETRQKLMSSCIVNFLVPLVPFISSLEVYDNV
RAVALSVFGILCQARESSAVQWAIENEVVEVCLISMDTGNELTRVIGLHIVESILRVDFG
ISYIFSPAADHLLNKLMRTLDNLVNLIAVVHNFSPRILFHTIRCYARLCHDERGHNLVKQ
SLPESIIKGTFHGNLKLLLQFTRFYHSERIRTNGVKCFLELLHFGGSGVILHNVENRFLR
ERNYQMFTRIFCCVYKILCKLHFWLKFLVRFRILKSVLTFSSFFSTFLVLLSMITSCIR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccaggaagaagatcgcccggacattcgtgatttgcccgacgagccttgggat
tgggaagaaatatctcgcaatcttctttacaacatcgatcaagagttgggggatgagaga
tctccatggggaagaaagaagcacagacttcgttggttggggaagccgagagcgattccc
caagtgatcctcaagcttcaggaccacaatttcagggaatctgctcttcaattgcttagt
tctttccttttcgagaagagggaagaggacccagagaattattacagagcgggattgctt
ctgttccattcctgcggtaccatggccattctgatacaggaggttctcttgatctatagg
atgatggctgatggaagtctaaatgagagagcatgcatgcgacttatcaatgtcattatt
ctattccagtgcattgcagctaatagagaaactcggcaaaagctcatgagctcctgcatt
gtcaacttcttggtacccttagtaccgttcatatccagcctggaggtgtatgacaatgtg
agagctgttgccttgtccgtgtttggcatcttatgccaggcaagagaatctagtgctgtc
caatgggctattgaaaatgaggtggtcgaagtatgcttgattagcatggacactggaaac
gaactcacgagagtgattggtctgcacattgttgaatccatacttcgggttgactttgga
atatcatacatattcagtcctgcagctgatcatctgttgaataaactgatgagaacattg
gataatttggtaaatctgatagctgttgtgcacaacttctctcctcgaatcctatttcac
accatccggtgctatgctcgcttatgtcatgatgaaaggggacataatcttgtgaagcag
tcactccctgaatccatcatcaagggcacttttcatggaaacctgaagctgcttcttcag
ttcacgagattttatcattcagaaagaatcaggactaacggtgtcaagtgtttcctggag
ctgctgcatttcgggggttcaggtgttatattgcataatgtagaaaaccggttcctcaga
gagagaaattaccagatgtttacccgcatcttttgttgcgtgtacaaaatcctctgtaaa
ttgcatttttggttgaaattcttagtaagatttcgaattctcaaaagtgtcttgactttt
tcttcttttttttctactttccttgttttgctgtccatgatcacgtcttgcataagatga
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