Rickettsia asiatica: RAS_00660
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Entry
RAS_00660 CDS
T06307
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ras
Rickettsia asiatica
Pathway
ras03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ras00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RAS_00660 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ras03021
]
RAS_00660 (rpoB)
03400 DNA repair and recombination proteins [BR:
ras03400
]
RAS_00660 (rpoB)
Enzymes [BR:
ras01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RAS_00660 (rpoB)
Transcription machinery [BR:
ras03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RAS_00660 (rpoB)
DNA repair and recombination proteins [BR:
ras03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RAS_00660 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
BBJ30957
UniProt:
A0A510GFC7
LinkDB
All DBs
Position
complement(58485..62606)
Genome browser
AA seq
1373 aa
AA seq
DB search
MVSLRDNIEAQPLSHNRRIRKNFGHINLVADIPNLIAIQKNSYEKNFLQLNIKDSERKNK
GLQSILNSIFPISDSSNIANLEFVKYEFDTPKYDVEECSQRSLSYAAPLKVTLRLSIWDI
DEDTGTREIKGIKEQEVYMGDIPLMTKNGTFIINGTERVVVSQMHRSPGVFFYHDEGKIH
SSGKLLYSARVIPYRGSWLDLEFDAKDVIYFRIDRKRKLYATTLLRAIGMSTEEIIKFYY
NSVTYKLVKNKGWAVKFIPQHITAHRLTSDLVDADTGNVLLKAGQKITLRLAKKYFGEGL
NNILVAHETLIGKYLSEDLRDPASDEVLAKIGEMITADMLNVINDLKIKNVNILVISPQS
GPYIRNTLFADKNQDREAALCDIFRVLRPGEPANIEAAESLFYNLFFDVERYDLSEVGRI
KMNSRLELNISEEVTILTIDDIKNIVRVLVELKDSKGIIDDIDHLGNRRVRSVGELIENQ
FRIGLVRMEKSVIERMSAGDVDTVMPHDLVNSKILVSVVKEFFSTSQLSQFMDQTNPLSE
ITHKRRLSALGPGGLSRDRAGFEVRDVHPTHYGRICPIETPEGQNIGLINSMATYARINK
HGFIESPYRRVKDGRVTDEVVYLSAIEEGKYKIGQANSKVDKDGKLQGEFINCRVEGGNF
VMVEPHEVDFIDVTPMQVVSVAASLIPFLENDDANRALMGSNMQRQAVPLIKTDAPFVGT
GVEGVVAKDSGASVLALHDGIVEQVDSNRIVIRTLEQKVDGSPSVDIYNLLKFQKSNHNT
CINQKPLVKVGHYVKKNDIIADGPSTDNGEIALGRNVLVAFLPWNGYNFEDSILISERIV
KEDVFTSIHIEEFEVIARDTRLGPEEITRDIPNVSEEALHHLDEVGIIYVGAEVKAGDIL
VGKVTPKSESPITPEEKLLRAIFGEKAFDVKDSSLHVPSGVSGTVVEVRVFSRRGIEKDQ
RAIAIAKQQIEKLAKDRDDELEIIEHFVFSWLEKLLVGQVIINGPKQVKAGQAITTEMLK
GLSKGQFWQFTVEDANVMNEIEQIKTHYDEKKEALDKRFATKVEKLQSGDDLPQGALKVV
KVFIATKHKLQPGDKMAGRHGNKGVISRIVPEEDMPFLEDGTVVDIVLNPLGLPSRMNIG
QILETHLGWASINLAKKISTLVKEYENKHIGIEQIKKFLIELYGENIHSVLERPAEEIIS
FCKEVSKGVHFATPVFDGAKVQDVKDMLKLAGQDPSGQVKLIDGRTGEYFDRLVTVGQKY
LLKLHHLVDNKIHSRSIGPYSLVTQQPLGGKSHFGGQRFGEMECWALQAYGAAYTLQEML
TVKSDDVNGRIKTYDSIVRGENNFESGIPESFNVMIKEFRSLCLNVKLEVTSS
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggtttcattaagggataatatagaagcacaacccttgtcacataatagaagaataaga
aaaaatttcggtcacataaatttagtagcagatataccgaatttgattgcaattcaaaaa
aattcatatgaaaaaaactttctacagttaaatattaaagattctgaaagaaaaaacaaa
ggtttacaatctatattaaactcaatttttcctatttcagattcctccaatattgctaat
ttagaatttgtaaaatatgaattcgatactccaaaatatgatgtagaagagtgcagtcaa
agaagtttaagttatgctgctcctcttaaagttactttaagattaagtatttgggatata
gatgaggataccggtactagagaaattaaagggattaaagagcaagaagtatatatgggt
gatatcccattaatgactaaaaacggtacttttattatcaacggtacggaaagagtagtt
gtatcacaaatgcatcgctcacctggcgtattcttttatcatgatgaaggaaaaattcac
tcttccggcaagcttttatattctgctcgtgttattccatatagagggtcttggcttgat
ttagaattcgacgctaaggatgttatttatttcaggattgatagaaaaagaaagctttat
gctactactttgcttagagctataggtatgagtactgaagaaattataaaattttattat
aattcagtaacttataagcttgttaaaaataaaggttgggcggttaaatttatacctcag
catattactgctcatcgtttaacaagtgatttagtagatgcagataccggaaatgtgcta
ctgaaagcaggacaaaaaattaccctgcgtttggctaaaaaatattttggagaagggctt
aataatattttagtagctcatgaaactttaatcggcaaatatctatctgaagatttaaga
gatcctgcaagcgatgaagtattagcaaaaatcggtgaaatgattactgctgatatgcta
aatgttattaatgatcttaaaattaaaaatgttaacatattagtaatcagtcctcaatcc
ggtccatatataagaaataccttatttgccgataaaaatcaggaccgtgaggcagcatta
tgtgacattttcagagttctaagaccaggcgaacctgctaatattgaagcagccgaaagc
ttattttataatttattctttgatgtggaaagatatgatctttcagaagtcgggcgaata
aaaatgaattctaggttagaactgaatatttctgaagaagttacgattttaacaattgat
gatattaaaaatatcgtaagagttttagtagagcttaaagacagtaaaggtatcatagac
gatattgatcatttaggtaatagaagggttagatcggtaggtgaattgatagaaaatcaa
tttagaataggtttagtccgaatggaaaaatctgtaattgaaaggatgtcggcaggtgat
gttgataccgtaatgcctcatgatttagtaaattctaaaattttagtttcggtagtaaaa
gaattttttagtacctcccaattatcccaatttatggatcaaacaaatccattatcggaa
ataactcataaaagaaggctgtcggcactcggtcctggaggtcttagccgagatcgagca
ggttttgaggtacgtgacgtacatccgactcattacggtcgtatttgtcctattgaaaca
cctgaaggtcagaatatcgggttaattaactctatggctacttatgccaggataaataaa
cacggttttatagagagtccgtatagaagagttaaagatgggcgtgtaaccgatgaagtg
gtatatctttctgctattgaagaaggtaaatacaaaatcggacaagcaaattctaaagtt
gataaagacggaaagttgcaaggagagtttattaattgccgtgttgagggtggaaatttt
gtaatggtagaacctcatgaggtggatttcattgatgtaacgcctatgcaggtagtatcg
gttgcggcttctcttatacctttcttagaaaacgatgatgctaaccgtgctttaatgggt
tcaaacatgcaaagacaagccgttcctttaattaaaacggatgcaccttttgtaggtacc
ggagttgaaggggtggtagctaaagattccggagcgtcagtgcttgcattacatgacggt
attgttgagcaggtagattcaaatagaatcgtgattagaactctagaacaaaaagttgac
ggttctccttcggttgatatttataacttactaaaattccaaaaatccaatcataatact
tgtataaatcaaaagcctttagttaaggtcggtcattatgttaagaaaaacgatattata
gctgacggtcctagtacggataacggtgaaattgctttaggtagaaacgtgcttgtggct
ttcttaccttggaacggttataattttgaagattcaattttaatatccgaacgtatagta
aaagaggatgtatttacatctattcatattgaagagtttgaagtaatagctagagataca
cgccttggtcctgaagaaattacccgggatataccgaatgtaagtgaagaagcgttgcat
catcttgatgaggtcggaataatttatgtaggtgcggaagtaaaagctggtgatatttta
gtcggaaaagtaacgccgaaaagcgagtcgcctattactccggaagaaaaattattgcgt
gctattttcggagaaaaagcttttgatgtgaaagattcatcgctgcatgtaccttccgga
gttagtggaactgtagtagaagtaagggtattttctcgtagaggtatagaaaaagaccag
cgagctattgctattgcaaaacaacaaattgaaaaattagcaaaagatagagacgatgaa
ttagaaattattgagcattttgtgtttagttggcttgaaaagcttttagtagggcaggtg
attattaacggtcctaagcaagtaaaagcaggacaagctattactactgaaatgctaaaa
ggtttatctaaagggcagttttggcagtttaccgtggaagatgcaaatgtaatgaatgaa
atagagcagataaagactcattatgatgagaaaaaagaggctcttgataaaagatttgct
actaaggtagagaaattgcaaagcggtgatgatttacctcagggagctttaaaagtagta
aaagtatttattgcaactaagcataaattacagcccggtgataagatggcaggaagacac
ggaaataaaggtgttatttcacgtatcgtacctgaagaggatatgccgtttttagaagat
ggaactgtggtagatatcgttcttaaccctctaggtcttccgtcccgtatgaatatagga
cagattttagaaacgcatcttgggtgggcatcaataaatttagcaaaaaaaatatctacc
ttagtaaaggaatatgaaaataaacatataggtattgagcagattaagaaattcttaatt
gaactgtatggagaaaatattcattctgtacttgaaagaccagcagaagagattatctct
ttttgtaaggaagtaagtaaaggcgtacattttgcaacgcctgtatttgacggagcaaaa
gttcaggacgttaaagatatgctaaagcttgccggtcaagatccttcaggacaagtaaaa
ttaattgacggtagaactggtgaatattttgatcgtctagtaaccgtcggacagaaatat
ttgctgaaattgcatcatttagtcgataataaaattcactcccgttctatagggccttat
agcttagtaacgcagcaaccgcttggaggtaagtctcatttcggcggacagcgtttcggg
gaaatggaatgctgggcattacaagcttacggtgcagcttatacgttacaggaaatgtta
acggttaagtcggatgacgtaaacggtaggatcaaaacttatgattctatagtacgcggt
gaaaataattttgaatcaggcattcctgaatcatttaatgttatgataaaagaatttaga
tctttatgtcttaacgtaaagcttgaagtgacttcgagttaa
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