Rickettsia asiatica: RAS_05360
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Entry
RAS_05360 CDS
T06307
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ras
Rickettsia asiatica
Pathway
ras03410
Base excision repair
ras03430
Mismatch repair
ras03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ras00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RAS_05360
03430 Mismatch repair
RAS_05360
03440 Homologous recombination
RAS_05360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ras03400
]
RAS_05360
DNA repair and recombination proteins [BR:
ras03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RAS_05360
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RAS_05360
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RAS_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
CDC45
Motif
Other DBs
NCBI-ProteinID:
BBJ31427
UniProt:
A0A510GGK8
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All DBs
Position
complement(485580..487253)
Genome browser
AA seq
557 aa
AA seq
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MSDLLARIVSLRVNNLEEIEDFLIPKIKNLLPDPLHLLDMEKAVDRTVKAILNNQKICIF
ADYDVDGATSAALLKNIFRDLNIICDIYVPDRIAEGYGPTPFAMQKIKDNSTQLLITVDC
GAMAHEALKYAKDAQLDVIVIDHHITTEILPDAVAIVNPNRIDEKSEYKHLAAVGVAFLF
ATAILSNLKKQNYFTQTLLQPNLMKYLDLVALGTVCDMMKLTGLNRAFVASGLKVMQQRQ
NIGIKTLYDIAGLNEIPTCYHLGFILGPRINAGGRVGKSSLGANLLSTSCSNEANKLAEE
LEKHNNERKVIELLMIEEAMEIALTQQDSSLLFIVKEGWHPGVIGIVAGRLKEKFDKPVA
IVALNDGIGKASCRSILGIDFGAEIINAKSKDLLIAGGGHAMAAGFTVTAEKLQELQEFL
NNAFRISINKLENHKQVEYDLDLSLNSINLPLMEELSTLEPFGQGNHEPIFKFDDLFVLK
ADIVGSKHIKCMLAPNKRGFGSKALSAIAFNSVGTSLEEVLLSPKAKNIAVIGTLKTNNW
QDNYTIQLIIKDILLKE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttacttgctagaatagtatcattaagagtaaataatttagaagagatagaa
gattttttaataccgaaaatcaaaaatttattacctgatcctcttcatctacttgatatg
gaaaaggctgtagatagaaccgttaaagctattttaaataaccaaaaaatatgtatcttt
gccgattatgatgtggacggtgctacttcagccgctttacttaaaaatatctttagagat
ttaaatataatatgtgatatttatgttcccgatcgtatagctgaaggatacggtccaact
ccttttgctatgcaaaaaattaaagataactctactcaattattaattacggttgattgc
ggtgctatggcacatgaagccctaaaatatgcaaaggacgcccagcttgatgttatagtc
atcgatcatcatataactacggaaatattaccggatgcagtagctatagtaaatccaaat
cgtattgatgaaaaaagcgaatataaacatttggcagccgtaggagttgctttcttattt
gcaactgccatattatcgaatttaaagaagcaaaattatttcacgcaaacactgcttcag
cctaacctaatgaagtatctagatttagtggctcttggtactgtttgcgatatgatgaaa
ttaacaggcttaaatcgtgcatttgtcgcaagcggattgaaagtaatgcaacaaaggcaa
aatatagggattaaaacattatatgatatagcagggcttaatgaaataccgacatgttat
catttaggttttattttaggtccgcgtatcaatgcgggcggtagagtaggaaagtcaagt
ttaggggctaatctcctatctactagttgttctaatgaagcaaacaaattagctgaagaa
cttgaaaaacataataatgagcgtaaagtaattgagttattaatgatagaagaagcgatg
gaaattgctttgacacaacaagatagtagtttattatttatcgtaaaagaaggatggcat
ccaggcgttataggaatcgttgccggcagattaaaagaaaaatttgataagccagtagcg
attgtggctttaaatgacgggattggtaaagcttcatgccgttctattttaggtattgat
ttcggtgctgaaattatcaatgctaaaagcaaagatttgctgatagcaggcggaggtcat
gctatggcagcaggttttaccgtaactgctgaaaaattacaagaattacaagaattttta
aataacgcctttagaattagtataaataagctagaaaatcataagcaagtagaatatgat
cttgacttgagcctcaatagtattaatttacccttaatggaagaattaagtactctagaa
ccttttggacaaggtaaccatgagcctatatttaagtttgatgatttatttgtattaaaa
gcggatatcgttggaagtaagcatattaaatgtatgcttgctccaaataagcgaggtttt
ggtagtaaagctttatctgctattgcttttaattcggtaggaacttcacttgaagaagtg
ttattaagccctaaagcaaagaatattgccgtaataggaacattaaaaaccaataattgg
caagataattatactattcaattaattataaaagatatacttctaaaagagtag
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