Rickettsia asembonensis: PG979_000088
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Entry
PG979_000088 CDS
T09987
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rase
Rickettsia asembonensis
Pathway
rase03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rase00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG979_000088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rase03019
]
PG979_000088
03110 Chaperones and folding catalysts [BR:
rase03110
]
PG979_000088
03029 Mitochondrial biogenesis [BR:
rase03029
]
PG979_000088
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rase04147
]
PG979_000088
Enzymes [BR:
rase01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PG979_000088
Messenger RNA biogenesis [BR:
rase03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PG979_000088
Chaperones and folding catalysts [BR:
rase03110
]
Heat shock proteins
HSP60 / Chaperonin
PG979_000088
Mitochondrial biogenesis [BR:
rase03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PG979_000088
Exosome [BR:
rase04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PG979_000088
Exosomal proteins of other body fluids (saliva and urine)
PG979_000088
Exosomal proteins of breast cancer cells
PG979_000088
Exosomal proteins of colorectal cancer cells
PG979_000088
Exosomal proteins of bladder cancer cells
PG979_000088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
WCR56031
LinkDB
All DBs
Position
complement(50074..51720)
Genome browser
AA seq
548 aa
AA seq
DB search
MATKLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSI
ELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGM
DLAVNAVVEEIKKSSKKINSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEA
KNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENPFILLFEKKLSNLQPMLPILEAV
VQSQRPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMMEDIAILTKGEL
ITEDLGMKLENVSIKSLGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAEITSDY
DKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLL
HASQTLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFN
AQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSDKEDSMPPMRGGM
GGMGGMDF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaacttattaaacatggttcaaaagctcgtgagcaaatgctagaaggcatt
gacatacttgcagatgcagtaaaagttactttaggtccaaaaggtagaaatgtacttatt
gagcaatcattcggttcaccgaaaattactaaagacggtgtgacggttgcaaaatcgatc
gagttaaaagataaaattagaaatgcaggagctcagctattaaaatcagctgctacaaaa
gctgcagaagtagccggtgacggtactactacagctacggtacttgctagagcattagct
cgtgagggtaataagttagtagctgccggttataatcctatggatttaaagcgtggtatg
gatttagcggtaaacgcagtagtagaagaaattaaaaaatctagtaaaaaaatcaatagc
caagaggaaatcgcacaggttggtactatatcttcaaacggtgataaggaaatcggtgag
aaaattgctaaggcaatggaagaagtcggtaaagaaggcgtgataaccgttgaagaagca
aagaattttagcttcgatgttgaagtagttaaaggtatgatgtttgataggggttatcta
tcaccatattttgtaacgaattccgagaaaatggttgctgagcttgaaaatcctttcatc
ttattatttgagaaaaaattatcaaatttacaaccgatgttacctatacttgaggctgta
gtacaatcacaacgcccgttattaattattgctgaggatgttgagggcgaagctcttgca
acgctcgtagtcaatagattacgtggtggtttaaaagttgcggcagtaaaagctccaggt
tttggtgatagaagaaaagcaatgatggaagatattgctatcctaactaaaggtgagctt
attactgaagatttaggtatgaagcttgaaaatgtgagtattaaaagtctagggacggca
aaaagagtaacaatttctaaagaaaataccgtaattgttgacggtaacggtgataagaaa
aatattgaagatagagtattacaaattaaatctcaaatagctgaaattacttctgattat
gataaagaaaaactacaagagcgtttagctaaactttccggcggtgttgccgtattaaag
gtcggcggtgccacggaagttgaagtaaaagagcgtaaagatcgtgttgaagatgcactt
gctgctacaagagcggcagttgaggaaggtgttgttgccggtggtggtgtaacattactt
catgcctcacaaactttaacaaagcttaaagtagagaataaggatcaacaagcaggtatt
gaaatagtaatagaagctttaaaggatccgctaaaacagattgttgaaaatgctggtgaa
aacggtggcgtagtagttggtaaattactagagcataaggataaaaattatggctttaac
gctcaagacatgcaatatgtcgatatgattaaagcaggaattatcgatccggctaaagta
gtgcgtactgcacttcaagatgctgcttccgttgcttcgttaattattaccacggaaact
ttaattgttgacgagccttctgataaagaagattcaatgccgccaatgcgtggtggtatg
ggaggcatgggcggtatggacttctaa
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