Rickettsia asembonensis: PG979_000101
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Entry
PG979_000101 CDS
T09987
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rase
Rickettsia asembonensis
Pathway
rase03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rase00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PG979_000101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rase03021
]
PG979_000101
03400 DNA repair and recombination proteins [BR:
rase03400
]
PG979_000101
Enzymes [BR:
rase01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PG979_000101
Transcription machinery [BR:
rase03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PG979_000101
DNA repair and recombination proteins [BR:
rase03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PG979_000101
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
WCR56044
LinkDB
All DBs
Position
complement(62508..63530)
Genome browser
AA seq
340 aa
AA seq
DB search
MLSLSKNWNTLIKPNKVAYENFPETNNKAKIVVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVKEDVSEVILNIKGIEVKMHVAEKRIMKLKATGPCVITAGMI
ETGHDVEILNPDHVICNLAKNKQLEMELTCKVGKGYVLSTNSYEDNLPIGEIAIDALFNP
VKSVTYKVENTRVGQVTDYDKLIMFVETNGDLLPEMAVGLAARILQEQLQLFISFEEQEE
DKQVKTDALPFLPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTESDMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENIQELSKRYEDSYN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgttaagtaaaaattggaatactttaataaagccaaataaagtcgcttatgaa
aattttccggaaaccaataataaagctaaaattgtagttgaacctttagaaagaggtttt
ggtttaacactcggtaatgctatgagaagagtattactttcttctttacaaggagcagct
atcacttctataaagatccctgctatagaacacgaattttcttctatacctggtgtaaaa
gaagatgtatcggaagtgattttaaacattaaaggtattgaagtaaaaatgcatgttgcg
gaaaaacgtatcatgaaattaaaagcaacaggaccttgtgttataacggccggtatgatt
gaaacaggtcatgatgtagaaatactgaatccggatcatgtaatttgtaatctagctaag
aacaagcagctcgaaatggaattaacttgtaaggttggtaaaggatatgtacttagcaca
aatagctatgaggataatttacctattggtgaaatagctatagatgctttatttaacccg
gtaaagagtgttacttataaagtagaaaatactagggtaggtcaggttaccgactatgat
aaattaattatgtttgtagaaactaacggtgatttattacctgaaatggctgtaggttta
gctgcacgtattctacaagagcaattacaattatttatttcttttgaagaacaggaagaa
gataagcaagttaaaactgatgctttaccgtttttaccttatttacttaagagagttgat
gaattggaattatcagttagatcggcaaattgtttgaaaaatgataatataatatatata
ggggatttagtaaaaagaacggaatctgatatgctgagaactccaaattttggtagaaaa
tctttaaatgagattaaagaaatattggcaaaatttaatttaagattcggtatggatgta
ccggattggccaccggaaaatattcaagaattatctaaacgttatgaagattcttataat
taa
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