Rickettsia asembonensis: PG979_000341
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Entry
PG979_000341 CDS
T09987
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rase
Rickettsia asembonensis
Pathway
rase03030
DNA replication
rase03430
Mismatch repair
rase03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rase00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG979_000341
03430 Mismatch repair
PG979_000341
03440 Homologous recombination
PG979_000341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rase03032
]
PG979_000341
03400 DNA repair and recombination proteins [BR:
rase03400
]
PG979_000341
Enzymes [BR:
rase01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG979_000341
DNA replication proteins [BR:
rase03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PG979_000341
DNA repair and recombination proteins [BR:
rase03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PG979_000341
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WCR56284
LinkDB
All DBs
Position
complement(265359..268907)
Genome browser
AA seq
1182 aa
AA seq
DB search
MRAEFIHLRTQSSYSFLESALTIEKVVELASSNKMSAICLADKGNLFGSLEFALYAVKKG
LQPIHGVILNIKYDIDIFAQILLIAKDETGYKNLLKLSSLTFTKNDRKLCDHIDFEDLIE
YQEGLIALCCYTDGIVGKCLLARSEEQAMLFARKLQEILGDRFYFEIMRHELPEEQFIED
SYIRIAAELAIPLVATNKVLFSEKRMHDAHDVLLCISAGVTKEYPDRKTVSENCYFRSPH
EMIELFSDLPSAIQNTVNLRERCYFAAHANPPMLPNFATKDISETDLIRKDAKEGLLARL
ATKFKSENISLEKQEELKIEYFARLNYELDIICNMNFAGYFLIVSDFIKWSKKEGILVGP
GRGSGAGSVVAWSLLITDLDPIKFGLLFERFLNPERISMPDFDIDFCQERREEVINYVRS
KYGNNRVGQIITFGKMQAKAVIKDVARVLSLPYKFADYLTELVPFSAVNPVSLEQAMREV
PELANAAKGNGLYNLEGEAELIKLVLDTSLILEGLHRHSSTHAAGIVIAGTDLVDIVPVY
KDANSDMLVVGYSMKYSEIAGLIKFDFLGLQTLTVITDCKKLLKEQGIEVDFNNMTFDDN
KTYQMLCKGKGVGVFQFESIGMKDALRRLKPDSIHDLIALGALYRPGPMENIPTYIACKH
KLQQPDYLHELLKPILEETYGVVIYQEQVQRIAQILAGYTLGAADLLRRAMGKKIKKEME
EQEEIFVKGAIANNISESQARSIFATVAKFAGYGFNKAHAAAYGIISYQTAYLKANYPAE
FLVACLNLELNNHDKINLFLQEAKDSGIKIIAPNINISEGYFSVKSSDTVIPHSVEPVIP
RLDRGIQEKDLKDPATSSRDDIESAIIFALGAIKGVTPNFGKLVTDERKARGAFKSITDF
IERLPPKAINSKLLENLIKSGCFDELHDNRLQLFSSIPKLLAYSTSYHEEQESNQFSLIK
VSSLSPTILVSSDYADKNTLAFYEFEAMGLFISNHPLTQYQEIFSRLNILNSADLHNNLP
DGANRINLAGVIQKKDSRMSARGRFVTLVLSDPENIFELSIFSEEVLKDYVHLLDVKSLV
VVNCDIVKDEGGIKLTAKSFSSIEDAINNKQFELQLYPQNHEELRQIVTLLAARTNNGDQ
SNAKATIYLQSEDVKNFVAKITLPEKFFLQGQDFEILKGYSK
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctgaatttattcatttaagaactcaaagctcttattcttttctagaaagtgca
ttaacgatcgagaaagtagtagagcttgcttcatcaaataaaatgtctgctatttgtttg
gcagataagggaaatttattcggctcgttagaatttgcattatacgcagtaaaaaaagga
ctgcagccgatacacggagttattctaaatataaaatacgatatagatatttttgctcaa
attttacttatagctaaagatgaaaccggctataaaaatttactcaaactatcaagcctt
acttttactaaaaatgatcgtaagctatgcgatcacattgattttgaagatttaattgaa
tatcaagagggattaatagcattatgctgttataccgacggtattgtcggaaaatgcttg
ctagctcggagcgaagagcaagcgatgctatttgcacgtaaattacaggaaattttagga
gatcgtttttactttgagattatgagacacgaactaccggaagaacagtttattgaagat
agttatattagaattgctgccgagcttgctattccgcttgttgctactaataaagttttg
tttagcgaaaaaagaatgcatgatgcacatgatgtattattatgtatatcagctggcgtt
actaaagaatatcctgatcgtaaaacagttagtgaaaattgttattttagatcaccgcat
gagatgatagagcttttttctgatttacctagtgccatacaaaatactgtgaatttaaga
gagcgttgttattttgcagcacatgcaaacccgcctatgctgcctaattttgccaccaaa
gatattagtgaaacggatttaattagaaaagatgcaaaagaagggttgcttgcaaggctt
gctacaaagtttaaatctgaaaatatttcattagaaaagcaagaagaattgaaaatcgaa
tattttgctcgtcttaattatgagctggatattatctgtaatatgaattttgccggttat
tttttaattgtgtccgattttattaaatggagtaaaaaagagggtattttagttggaccg
ggtagaggctcaggagcaggctcggttgttgcttggagcttgcttattactgatctcgat
ccgattaaattcggcttattatttgaaagatttttaaatcctgaacgtatttcaatgcct
gacttcgatattgatttttgtcaagaaagacgtgaagaagtaattaattacgtacgctct
aaatacggcaataatagagtaggacagattataactttcggtaaaatgcaggcaaaggct
gtaattaaggatgttgctcgcgtacttagtttaccttataaatttgctgattatctaacg
gagcttgtaccttttagtgcggttaatcccgttagcctagaacaggcgatgcgtgaagtt
ccggagcttgcaaatgctgctaaaggtaatgggctgtataatttggagggtgaagcggag
ttaattaagctagtgcttgatacttcgttaattcttgaggggttacataggcattcctca
actcatgctgcaggaatcgtaatagcaggtactgatttagtcgatatagtaccggtatat
aaagatgctaattccgatatgctggtagtcggttattctatgaaatattccgaaattgcc
ggtttaattaaatttgattttttaggactgcaaaccctaacggttattactgattgtaag
aaactacttaaagaacaaggaatagaagtagattttaacaatatgacctttgatgataat
aagacttatcaaatgttgtgtaaaggtaaaggagtcggcgttttccaatttgaaagtatc
gggatgaaagatgcacttaggcgccttaaacctgattctatacatgatttgatagctctt
ggggctttatatcgtccgggtcctatggaaaatatccctacctatatagcttgtaagcat
aaattacaacagcctgattatttacatgagctactaaagccaatcctagaagaaacttat
ggagtggtgatatatcaggagcaggtacaaagaattgctcagattcttgcaggttatacc
ctaggagctgctgatttgcttcgtagagcaatgggtaagaagataaagaaagaaatggag
gagcaggaagaaatcttcgttaaaggagcaattgctaataatatttcggaatctcaagct
agatccatttttgcaaccgtggctaaatttgcaggttacggttttaataaggcacatgct
gcagcttacggcattatttcataccaaaccgcatatcttaaagctaattacccggcagag
tttttagtagcatgtttaaatcttgaattaaataatcacgacaaaattaatttatttctg
caggaagcaaaagatagcggcataaaaattattgctcctaatattaatatttctgaagga
tattttagtgtaaagtcttcggacactgtcatcccacatagtgtagagcctgtcataccg
cgtcttgaccgcggtatccaggaaaaagacttaaaagatcccgctacaagctcgcgtgat
gatatcgagagtgcaataatcttcgccttaggggctattaagggagttacgccgaatttc
ggtaagttagtgacggacgagcgaaaagcaagaggagcgtttaaatcaattaccgatttt
attgaaagattaccgccaaaagctattaatagtaaattactagaaaatttaattaaatca
ggctgttttgatgagctacatgataatcgattgcaattattttcaagtattccgaaattg
cttgcttattcaacttcatatcacgaagagcaagaatctaatcaatttagtttaattaaa
gtttctagtttaagtccaactattttagtatcaagtgattatgccgataaaaatacttta
gctttttatgaatttgaggctatgggtttatttatctctaatcatcctcttacgcagtat
caagaaatatttagccgtttaaatattttaaatagtgcggatttacataataacttacct
gacggtgctaaccgaataaatcttgccggtgtaatacaaaaaaaggattctcgtatgtcg
gcaagaggtagattcgtgacgctcgtgctttccgaccctgagaatatatttgaacttagt
atttttagtgaggaagttttaaaagattatgtacatttactcgatgttaaaagtttggta
gttgttaattgtgatatagttaaagatgaaggaggaataaaactaacggcaaaaagcttt
tcatcaattgaggatgcaattaataataaacaatttgagttacagctttacccacaaaat
catgaagaattacggcagatagtaaccttgcttgcagctcgcactaataacggggaccag
agtaatgctaaagctacaatctatttacaaagcgaagatgtaaagaattttgtagcaaaa
attacattacctgaaaagttttttcttcaagggcaagattttgagattttaaaaggatat
agtaaatag
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