Rickettsia asembonensis: PG979_000394
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Entry
PG979_000394 CDS
T09987
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rase
Rickettsia asembonensis
Pathway
rase03030
DNA replication
rase03430
Mismatch repair
rase03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rase00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG979_000394
03430 Mismatch repair
PG979_000394
03440 Homologous recombination
PG979_000394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rase03032
]
PG979_000394
03400 DNA repair and recombination proteins [BR:
rase03400
]
PG979_000394
Enzymes [BR:
rase01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG979_000394
DNA replication proteins [BR:
rase03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PG979_000394
DNA repair and recombination proteins [BR:
rase03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PG979_000394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_14
AAA_5
RuvB_N
AAA_30
AAA_19
AAA_18
AAA_assoc_2
AAA_16
RNA_helicase
Viral_helicase1
AAA_17
AAA_24
TIP49
ResIII
Motif
Other DBs
NCBI-ProteinID:
WCR56337
LinkDB
All DBs
Position
328426..329955
Genome browser
AA seq
509 aa
AA seq
DB search
MLDINSSNQYIPFARKYRPSNFTELQGQEVLVKVLSYTILNDRLTGGYLLTGIRGVGKTT
SARIIAKAVNCSALITENTTIKTCEQCTNCISFNNHNHPDIIEIDAASKTSVDDIRRIIE
SAEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEEPPPHIIFIFATTEVQKIPATIISR
CQRYDLRRLSFEEIFKLLEYITKQENLKTDIEALRIIAHKSEGSARDAVSILDQAASMSA
KSDNIISPQIINQMLGLVDSSVIIEFVECIIHRETEKAINLINKLYDFSVNLEIFIESVA
DFIAYLNKVKMLPNYSLPIYESFNDRTKNLLNTTNLPYLSILWQIYNKGVGEIKISYNQL
TETEMLVIKSIYSTSLPLLADFSGNNQNLNQPINPEIKKKFEIIDFLEYLYKNNEIDIYY
FLLNNTELKNLSDNRLELVSLEVTSKIKKQIEDLLAAFTKEKLEIVIIKEQNKQTLKNQL
IGKIEVSNDFGLIKKHFPNVTISDILLKN
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgctagatataaattcatctaatcagtatattccttttgcaaggaaatatcgtcctagt
aattttaccgagcttcaggggcaagaggtattagtcaaagttttaagctatactatttta
aatgataggctcaccggaggctatcttttaacaggtattagaggggtcggcaaaactact
tccgcccgaattattgctaaagccgtaaattgctctgctttaattactgaaaacacgacc
attaaaacatgtgagcagtgtacaaactgcattagttttaacaaccataatcaccctgat
ataatcgaaattgacgcagcaagtaaaactagcgtagatgatatacgtagaattatagaa
tccgctgaatataaacctctgcaagggaagcataaaatctttattatcgatgaagtgcat
atgctctctaagggagcatttaatgcacttcttaagactttagaagaaccgccgcctcat
ataatatttatctttgcaacgacggaagtacaaaagatacctgcaactattatctcaaga
tgtcaacgctatgatttaaggcggttgagttttgaagagatttttaagctacttgaatat
ataactaagcaggaaaatttaaaaaccgatatagaggcccttagaattatagctcataaa
tctgaagggtcggcacgtgatgcagtatctattttagatcaagcagctagtatgtcggca
aaatccgataatataattagccctcaaataattaatcaaatgcttgggcttgttgatagt
tcggttataatagaatttgtcgaatgtattatccacagagagacggaaaaagctataaat
ttaataaataagctttatgatttttcggttaatcttgagatttttatagaatcggtagca
gattttattgcgtatcttaataaagtaaaaatgttacctaattatagtttgcctatatat
gaatcgtttaatgatagaactaaaaacctactaaatacaaccaacttgccgtatttatca
atcttatggcaaatatataataagggagtaggggaaataaaaatttcctataatcaacta
acagaaacggaaatgttagttataaaatctatatattcgacatcgctacccttgcttgca
gattttagcggtaataatcaaaatttaaatcaaccaattaatccggaaataaaaaaaaaa
tttgaaattatagattttcttgaatatctatataaaaataatgagatagatatatattac
ttcctacttaataacacagaacttaaaaatctcagtgataatagattagaacttgtaagc
cttgaagttacaagcaaaataaaaaaacaaatagaagatttgttagctgcttttactaaa
gagaagcttgagatagtaatcataaaggaacagaacaagcaaaccttaaagaatcagtta
ataggtaagattgaagtaagtaatgattttggtttaattaaaaaacattttcctaatgta
acaatttcagatatattacttaaaaattaa
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