Rickettsia asembonensis: PG979_001252
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Entry
PG979_001252 CDS
T09987
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rase
Rickettsia asembonensis
Pathway
rase03420
Nucleotide excision repair
rase03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rase00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PG979_001252
03430 Mismatch repair
PG979_001252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rase03400
]
PG979_001252
Enzymes [BR:
rase01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PG979_001252
DNA repair and recombination proteins [BR:
rase03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PG979_001252
MMR (mismatch excision repair)
Other MMR factors
PG979_001252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
AAA_12
DEAD
UPF0128
DUF87
ResIII
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
WCR57195
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All DBs
Position
1105949..1107910
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AA seq
653 aa
AA seq
DB search
MQNQDFIHTLNPQQQKAVLHTEGPLLLLAGAGTGKTKVLTSRIANIIHQNLASPQNILAV
TFTNKAAKEMAERVNSLINCYGLNIGTFHSMAAKILRDQIEHLNLGLNNRFTIISHDDQL
KLVKDIVKLKDIDTKKYAPKLIHIIISRWKDQGLLPSKLSASDTNLPLQRVAKLVYEEYQ
KNLLISNVLDFGDLLLYNNELFIKNPEILRYYQEKYRYILIDEYQDTNVVQYLWARMLAS
LYKNICCVGDDDQSIYGWRGAEVGNILRFEKDFAGATIIKLEQNYRSTLPILAAASNVIN
NNKNRHGKTLWTDRESGEKIKIISCWSDKEEARYIASEIDKLVREDRYNAGNIAILVRAG
FQTRSFEEAFINSAMPYKIIGGLRFYERMEIRDVLAYIRISLNQNDNLALERIINVPKRA
IGAASLNKIRVYALEQNISNFAAIKEMLEMGEIKTKPYETLKDLVTKIDNWHERFSIDAP
INVVKAILDDSGYLEMLQEEKTEEAFGRIENINEMLRAIAEFNDVHDFIEHSSLVMENEV
LETNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQRSLDEDGEKGLEEERRIAYVGI
TRAKKDLYITHAESRKIFYEIVRSYPSRFITEIPDEITIRTSSMKKYNSFYKF
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcaagatttcatacatacattaaatccacaacagcaaaaagcagttcttcat
actgaaggaccgcttttattgcttgcaggtgcagggacaggtaaaacaaaagtacttacc
tcaagaatagctaatattattcaccaaaatttagcctcacctcaaaatattctagccgtt
acttttactaataaagctgctaaagaaatggcggaaagagttaacagtctaattaattgc
tacggtcttaatataggcactttccactcaatggcagctaagatattacgtgaccaaatt
gagcatttaaatcttggtttaaataatagatttactattattagtcatgatgatcaatta
aaactagttaaagatatagtaaaactaaaagatatcgatactaaaaaatatgctcctaaa
ttaatacatatcataatttcgagatggaaagatcaaggattattaccaagtaaactatca
gcatcagatactaatttaccgttgcagagggtggcaaaacttgtatatgaagaatatcag
aaaaatttacttatttctaatgttttagattttggagatttgctactttataataatgag
ctttttattaaaaatcctgaaatactaagatattaccaggaaaaatatcgatatatttta
atcgatgaatatcaagacactaacgttgtccagtatttatgggcaagaatgctcgcaagt
ttatataaaaatatttgctgtgtaggggatgatgatcaatctatctatggttggcgagga
gcggaagttggtaatatattacgctttgaaaaagattttgcaggtgcaacgattattaaa
ttagagcagaattatagatcaactttgccgatacttgctgctgcttccaatgttattaat
aataataaaaaccgtcacggtaaaacgttatggacggatagggaaagcggtgaaaagata
aaaattatctcttgttggagtgataaagaagaagcaagatatatagccagcgaaatagat
aaattagtgagagaagaccgatataatgccggcaatattgcaatattagtacgagccgga
tttcaaacaagaagttttgaggaagcgtttataaatagtgctatgccttataaaattata
ggaggtttgcggttctatgaacgtatggaaataagagacgtgcttgcttatatccgtata
tctttaaatcaaaatgacaatctagcacttgagcgtattataaatgtgccgaaaagggca
ataggtgcagctagcttaaataaaattagggtctatgcacttgagcaaaatatttctaat
ttcgcagccattaaagaaatgttggaaatgggcgagattaaaacaaaaccatatgaaact
ctaaaagatttggttactaaaattgataattggcacgaaagatttagtatagatgctcca
ataaacgtagttaaagcaatacttgatgattccggttatcttgaaatgcttcaagaagaa
aagaccgaagaagcattcggtagaatcgaaaatattaacgaaatgcttagagctattgcc
gaatttaacgatgttcatgattttatcgaacattcaagtttagttatggaaaacgaagtg
cttgaaactaattacggtggttctgttactataatgaccctgcacgcagctaaagggctt
gagtttgacgtggtgtttttaccgggctgggaagagggggtatttccgtctcaaagatct
ttagacgaagacggcgaaaaaggcttagaagaagagcgccgcattgcttatgtcggcatt
acgagagccaaaaaagacctctatattacccacgccgaaagccgaaaaatattttatgaa
atagtccgttcttacccttcaaggttcataaccgaaatccctgatgaaattacgatcagg
acctcttctatgaaaaaatacaattctttttataagttttaa
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