Rickettsia asembonensis: PG979_001347
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Entry
PG979_001347 CDS
T09987
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rase
Rickettsia asembonensis
Pathway
rase03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rase00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG979_001347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rase03021
]
PG979_001347
03019 Messenger RNA biogenesis [BR:
rase03019
]
PG979_001347
Transcription machinery [BR:
rase03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PG979_001347
Messenger RNA biogenesis [BR:
rase03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PG979_001347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
AAA_22
AAA_25
OB_RNB
Fungal_virus_P2_C
Spore_III_AA
S1CSD-TOTE-2
NACHT
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
WCR57290
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All DBs
Position
1186480..1187856
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AA seq
458 aa
AA seq
DB search
MNTTNKESTEELNNTESNNNHNNFPENGNIINLKQLKRKLPEELQAQAEELKIENINSLL
KQELVFAILKKSVEQGGLIVGEGVLEVLPDGFGFLRSPEVNYLAGPDDIYISPSQIRRFG
LRTGDTVEGQIRAPKAGERYFALLKVNRVNFEDTSKAYHRVHFDNLTPLYPDEKLGLELE
NNSKDGKDFSTRVIELVAPMGKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLL
IDERPEEVTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIEKAKRLVEHKKDVVILVDAIT
RLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMD
EVIFEEFKGTGNSEIVLDRKIADKRIYPAIDITRSGTRKEDLLVDKIILNKMWVLRRIID
PMGSSEAIEFLLKKLENTKTNGEFFEMMKSPERPKNGL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaactaataaagaatctacagaagaacttaacaataccgaatccaataacaat
cataataattttccagaaaacggtaatattattaatttaaaacaattaaaacgtaaatta
ccggaggaactacaagctcaagcagaagaattaaaaatcgaaaatattaattcattactt
aaacaagaattagtttttgcaattttgaaaaaatctgtagagcagggaggcttaatagtg
ggagaaggagtacttgaagtactacctgacggatttggttttttacgttcgccagaagta
aactatttagcaggtcctgatgatatttatatttctcctagtcaaattcgtcgttttggt
ctgcgtaccggtgatacggtagaaggtcagatcagagctccaaaagccggagaacgttat
tttgctttactgaaagtcaatagagtaaattttgaagacacttctaaagcttatcatcgt
gttcattttgataatttaactcccttatatcctgatgaaaaattaggattagaacttgaa
aataatagtaaagatggtaaggattttagtacacgggttattgaacttgttgcccctatg
ggtaaaggacaacgtgcattaatagtagcaccgcctcgtacaggtaaaaccgtattatta
caaaatatagcacatgcaattacaactaataatccggaagtatttttaatagtactgtta
atagacgaaagacctgaagaagtaaccgatatgcaacgttccgtgcgtggagaggttgtt
agctctactttcgatgaaccagcaagtaggcacgtgcagcttgcagaaatggttattgaa
aaagcaaaacgtttagtagaacataaaaaagacgtggtaattttagtagatgcgataaca
cgtttagctcgtgcttataataccgtagtgccgtcatcagggaaagtattaacgggcggc
gttgatgctaatgcactacaaagaccgaaaagatttttcggagcagcaagaaatatcgaa
aatggcggttcgcttactataatcggtacggctttaattgaaactggttctcgtatggat
gaagtaatttttgaagaatttaaaggtacaggtaattctgagatagttctagatcgtaag
attgccgataagcgtatttatccggctattgatataactagatcaggaactagaaaagaa
gatttattagtagataaaataatattaaataaaatgtgggttcttcgtcgtattatcgat
ccgatgggtagcagtgaggcaatagaatttttactcaaaaaacttgaaaatactaaaact
aacggtgagttttttgagatgatgaagagtcctgaacgccctaaaaacggtttatag
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