Rickettsia asembonensis: PG979_001448
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Entry
PG979_001448 CDS
T09987
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rase
Rickettsia asembonensis
Brite
KEGG Orthology (KO) [BR:
rase00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rase03016
]
PG979_001448
Enzymes [BR:
rase01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PG979_001448
Transfer RNA biogenesis [BR:
rase03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PG979_001448
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Penicillinase_R
Motif
Other DBs
NCBI-ProteinID:
WCR57391
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All DBs
Position
1279850..1280695
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AA seq
281 aa
AA seq
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MQIIDNQKTLEEFCNRLANKTCLSIDTEFERRYTYYAQLSIVQVKAEEYCGIIDALSNLD
LNIFNKLLADNNITKIFHAPREDLEIFYNLFKILPSNVFDIQIAANICGFGKQLSYDDLC
YKLIGITIDKTHQKSNWLKRPITSDMLNYAMLDVEYLYKIYKELNNIIIRNNLTNKYQTT
LSSLLDVRNYKVEPKNVWKKIKYRSDDESFNHKIQALAAYREENAQTINIPRKHFILDED
LIKLSKYPPLNHKDFKNLNLKSKYLHKQKYKDEIISLCNNL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattattgataatcaaaaaacattagaagaattttgtaacaggttagcaaataag
acatgcttaagcatagatacggaatttgagcgtcgctatacctattatgctcagcttagt
atagttcaagttaaagcagaagaatattgcggaataattgatgcattaagcaatttagat
ctgaatatttttaataagttacttgcagataataatattactaaaatatttcatgctcct
cgtgaagatttagagattttctataatttatttaaaatcctaccttctaatgtttttgat
atacaaattgcagcaaatatttgcggattcggtaaacagctaagctatgatgacctttgc
tataagctaataggcattactatcgataaaacccaccaaaaatctaactggctaaaacgc
cctattactagtgatatgttaaattatgcaatgttagatgtggagtatttgtataagata
tataaagagctaaataatataattattagaaataatttaactaataaataccaaactact
cttagttctttattagatgttagaaattataaggttgagccgaaaaatgtgtggaaaaaa
ataaaatatagaagtgatgatgagagttttaaccataaaattcaagctcttgcagcttat
cgtgaagagaatgcacaaactataaatattcctcgcaagcattttattttagatgaagat
ttaataaagcttagtaaatacccgccattgaatcacaaggattttaaaaatctaaattta
aaaagcaaatatttacacaaacaaaaatataaagatgaaataataagtttgtgtaataac
ttataa
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