Riemerella anatipestifer CH3: M949_0074
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Entry
M949_0074 CDS
T03250
Name
(GenBank) DNA polymerase i
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rat
Riemerella anatipestifer CH3
Pathway
rat03030
DNA replication
rat03410
Base excision repair
rat03420
Nucleotide excision repair
rat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M949_0074
03410 Base excision repair
M949_0074
03420 Nucleotide excision repair
M949_0074
03440 Homologous recombination
M949_0074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rat03032
]
M949_0074
03400 DNA repair and recombination proteins [BR:
rat03400
]
M949_0074
Enzymes [BR:
rat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M949_0074
DNA replication proteins [BR:
rat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M949_0074
DNA repair and recombination proteins [BR:
rat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M949_0074
NER (nucleotide excision repair)
GGR (global genome repair) factors
M949_0074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
ACS_CODH_B_C
DUF2202
Motif
Other DBs
NCBI-ProteinID:
AIH01245
LinkDB
All DBs
Position
complement(66683..69490)
Genome browser
AA seq
935 aa
AA seq
DB search
MTENTDKKLYLVDAYAMIFRGYYAFIRNPRLTTGGLDTSAIYGFTNSLIELIKKERPTHL
AVVFDVGRQNVRHEDFSDYKANRAETPEAIKIAVPYIHRILKAMHIPILGVEGYEADDVI
GTIASKAEKQGYEVFMVTPDKDFAQLVTEHIKIYKPRLKGGDVEILGVKEVLEKYEIENP
KQIIDYLGMMGDSVDNIPGLEGVGEKTAKKFIKEYGSMENLLANTHQLKGKLREKVEASA
ERGLMSKKLATILCDAPIEFHQEEYDLETPNFEEVKQIFEEIEFRRLYENLYKAFSTENS
AEEKKSDKDSVQSPVQLDLFSDFEALEQATTTKHTIEDREHLYQYIDTEKGQLLLLQNLL
KQKAVCFDTETTSLDEMEAELIGISFSYKKGLAYYVPIPENRAEAQAIVERFRPFFEKES
ILKIAHNLKYDYKVLLNYGIEVTGNLFDTMIAHYLLNPDGRHGMDYLSEMYLNYKPIALE
TLIGKKGKGQKTLREIDLPTQTQYAAEDADITFQLYEIFSPQLRKEEVEEVFYKIEMPLV
KVLAKMELAGVALDKEWLKDESISLEQDLKILEGQIFEQAGEEFNINSPKQLGDILFEKL
KLDPKAKKTKTGQYSTSEDVLQKLSHKHEIIKLILEYRQLQKLKSTYVDALPNQISPIDG
RVHTSFAQTVAATGRLASNNPNLQNIPIRTERGQQVRGAFVASKGAKIVSADYSQIELRL
IAEISGEETMINAFKEGQDIHASTASKLFDVPLSEVSKTQRSQAKTVNFGIIYGQSAFAL
ADQTGLSRTDAKQLIDSYYETYPKLKAFMAEQVQVARKKGYVETIMGRRRHLKDINSNNF
VVRGHAERNAVNAPIQGSAADIIKLAMIKIDSEIKAQGLKTKMLLQVHDELIFEVPNEEI
EVATTLIKQEMETAYSTKVPLLTEVGVGDNWLEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaataccgataaaaaactgtatcttgtagatgcctacgcaatgatttttaga
ggctactatgcctttatcagaaatcctagacttaccactggtggattagacacttccgct
atctatggttttactaactctcttattgagttaattaaaaaggaacgccctacacattta
gcagtcgtttttgatgtgggaaggcaaaatgtaagacacgaagatttttctgactataaa
gccaacagagccgaaactccagaggctataaaaattgcggtgccttacattcatcgtatt
ttaaaggcaatgcatatcccaattttaggagtagagggctacgaggcagatgatgttata
ggtactattgcaagcaaggcagagaagcaaggctacgaggtgtttatggtaacgccagat
aaagattttgcacaactcgttacagagcatataaaaatctataaaccaaggttaaaaggt
ggcgatgttgaaatcttaggagtaaaggaagttttagaaaaatacgaaatagaaaaccct
aagcagattatagattatctaggaatgatgggcgactcggtggataatatccctgggctt
gaaggagtgggagaaaagaccgcaaaaaaattcatcaaggagtatggctcaatggagaat
cttctagccaatactcatcagcttaaagggaaattaagagaaaaggtggaagcctccgca
gagcgtggtctaatgtcaaaaaaactagctaccatactttgtgatgctcccatagaattc
caccaggaggagtacgatttagaaacacctaactttgaagaagtaaaacaaatttttgaa
gagatagaattccgaagattgtacgaaaatctttacaaagccttctctacggaaaattca
gcagaggaaaaaaaatcggataaagattctgttcagtcgccagtacagttagatttattt
tcagattttgaagcattagaacaagctacaactaccaaacataccatagaagaccgagag
catctctatcaatatatagatacagagaaaggtcagcttttgctcctacaaaatctattg
aaacaaaaagcggtttgttttgatacagaaaccacctctttagatgagatggaagcagag
cttataggcattagtttcagttataaaaaaggcttggcttattatgtcccaatccctgaa
aatagagcggaggcacaggctattgtagagcgttttcgtccgttttttgaaaaggaaagt
atcttaaaaattgctcataatctaaaatatgactataaggtactcctaaattacggtata
gaagttacaggtaatttatttgatacaatgattgcccactacttgctcaatcctgatggc
agacacggtatggattacctttcggaaatgtatcttaattataaacccatagcattagaa
actttaattggcaaaaaaggaaaagggcaaaaaacattacgggaaattgacttaccgaca
caaacacaatacgccgcagaagatgctgatattacctttcagttatacgaaattttttcg
cctcaactaagaaaagaagaagtagaagaggtattttataagatagaaatgcctttagtt
aaagtattagctaaaatggaacttgctggtgtagctttggataaagaatggctaaaagat
gaaagtattagcttagagcaagatttaaagattttagaaggacaaatatttgaacaggcg
ggagaagagtttaatattaactctcctaaacagttaggggatatactatttgaaaaatta
aaattagaccctaaagctaagaagacgaaaacaggacagtattccacttcggaagatgtt
ttgcaaaaactttctcataaacacgagattatcaagttaattttggaataccgacaatta
caaaaactaaaatccacttatgtagatgctttgccaaatcaaatcagtccaatagatggc
agagtgcataccagctttgcccagacggtagccgctactgggagattagcaagtaataac
cctaatttacagaatatccctataagaacggaacgaggacaacaggtgagaggtgctttt
gtagcttccaaaggggctaaaattgtttcagccgactattctcaaatagagcttcgtctt
attgcagaaatttcaggggaggaaacaatgataaacgcatttaaggaaggacaagatatt
cacgcttctacggcttccaaattatttgatgttcctttgagtgaagtttctaaaactcaa
agaagccaagctaaaacggttaattttggtattatttatgggcaaagcgctttcgcttta
gcagaccaaacaggtctttctagaactgatgccaaacagcttatagactcctattacgaa
acttatccaaagctaaaagcctttatggcagagcaagttcaagtggctagaaagaaaggt
tatgtggaaactataatgggaagaagaagacatctaaaagatatcaactctaacaatttt
gtagtaagaggacatgccgaaagaaacgctgtaaatgctccgatacaaggtagtgctgct
gatattataaaattggcaatgataaaaatagattctgaaataaaagctcaaggtttaaaa
accaaaatgcttttacaggtacacgatgaattgatatttgaggttcccaatgaagagata
gaggttgcaactactttaataaaacaagaaatggaaactgcttattccactaaagtacca
ttgcttacggaggttggggtaggagataattggctagaagctcattaa
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