Riemerella anatipestifer CH3: M949_0169
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Entry
M949_0169 CDS
T03250
Name
(GenBank) hypothetical protein
Organism
rat
Riemerella anatipestifer CH3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GM_CSF
Cdh1_DBD_1
Motif
Other DBs
NCBI-ProteinID:
AIH01340
LinkDB
All DBs
Position
complement(178545..182918)
Genome browser
AA seq
1457 aa
AA seq
DB search
MSDLEPIKLDFTVNNSVVFEEFAKMVKAAQEQTKSVDNAQSKFKEYINTQLSASGALSQS
AQLTDAQTKALQRHAETIDYLKGQIANTFDPTQLGVYNYQLSQAQQAINSILESANNKAA
LIDTAEMEKANQKLQEAERLLDQISDKTFTPPFASPEELEVLSTEINNANDELEQLGIVI
DFISAKMGTMDSGSQAFKDLEKDIATANQMLGRLPQSYDTAGNSIDQMTDVLKEFQNQLN
AETDPEKIKILNQNIENLENSIKKLKNAGKEGFDDFGNKLEENREKAVSLQTELENLVQS
MARLRMAGKQKSDEYEALKSRAIEARAAIASTNQEINASASSTSGLDTLIRATSAVASGY
SLAQSTAALFGAENEEVEQSIMKITAAMSALQSLQQIQAELKKSDSLATIAQTKAQGLYT
AVVGSSTGALKIFRIALASTGIGLIIILLASLVANWDKVTASIKKSFPALNSFGDKLDNM
KAYVMGFLNAFLSLSKTVLDTLLKIKNVGFKGALNNLKNAKSEAEKAFENGKQNSLNASA
QDKKNAQLEKSLEIYDKETERLEHLTGKKQYDRREKSIKAQLRLVDKGSKEEAELIHKKN
LLLADKEKERNDEAKKQADKRQKEAEKAAKKAEQLARQEAEDRKAAKASIAQAEREYQKS
RMIATDKEIADIQDKYAKLRAEAQKAKLGAMDMMRIDNLEKAETKSVTEKHANEQFFKEL
EEQKELFAAYEVFKTKVGKEEADKRYQNELLAFENYGALLDAEIEKIKALGDALTPEQFQ
KLEKLQSEKKSYDKDKNKEAEQKYAEAYNSLLSFDDKRRAIDKKYQQDKVLLTQITDEKV
RQAKLAELEFQKKAALDAVNTEAYDRETIMQRLSENLMGITRRELNNRIASLEEYLEKAG
DHLDETQKEFVQNELKKAKAVRATTDVGVEEKVLLQEKEAILKRITDLQSKGITNVSDEL
KQLEEVNMKLKDILAKKFAKVSEVAGQLGGAFSELGGALKEYDEGLGDTVESMGELLNVA
SDVAGALADFASGPQGIVGGIMKTIKAITSIFSIGAKARESERKAQEQIKKYHDEIFQSQ
LNYNSELRKRVAEEVKLNDLYKSRVTNIREELEANRKNAESIKKDQEAVFKRLLNARTVT
GMHTEKYGGFLGIGRKTRAVEETSSVAKLLGIGKWVEKEIAKIAGWSLKIRVFEPGEVEL
TDKIFEDLEKLNAEKPLTGDAKTAYEQLKKLREEYGSIENARRELDKQLREAITGTTADS
IADSIKQGIASGKKSFADFADDIEGFLRNAVLAGLETDVFRKKTQELHEVMEEMLQDGVI
TSEERERFNQLYMAIVEESKQKVDMLNQAGINVIQQQERLNSLQGAIKGASQESIDILSG
HFAGVRLHVIEIVKMMKSNGTSGLEKLSKLIEIQMNIERNTRKTAENTEKLHDIDEGISK
VEKAIKGNGNDAKGLGF
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttagagcctataaaattagattttaccgtgaataatagcgtcgtctttgaa
gaatttgcaaagatggttaaggctgcacaggagcaaactaaaagtgtggataatgctcag
tcaaaatttaaagagtatatcaacacgcaattgtcggcatcgggagctttgtctcaatct
gcccaattgaccgatgctcaaaccaaagccctccaacgccacgctgaaacgatagattat
ttgaaaggtcaaatcgctaatacttttgaccctacgcagttaggtgtgtataattatcaa
ctaagccaagcccaacaggctattaattctatattagaatcggcaaataataaagcggcg
ttgatagacactgccgaaatggaaaaagcgaaccaaaaactccaagaggctgagcgatta
ttagaccaaatttcggataaaacattcacacccccgtttgcttctcccgaagagttggaa
gtgcttagcacggaaatcaacaacgctaacgacgagttggaacaattgggcattgtgata
gattttatctcggcgaaaatgggaaccatggacagtggttctcaggcgttcaaagattta
gagaaagacattgcaacagcaaaccaaatgcttggaagactgcctcaatcgtacgacacg
gcaggcaatagcattgaccaaatgaccgatgttctcaaagagtttcaaaatcaactcaac
gctgaaactgaccccgaaaaaataaagattctcaatcaaaatatagagaatttagaaaac
agtatcaaaaagctgaaaaatgcaggaaaagagggttttgatgactttgggaataagctg
gaagaaaacagagaaaaggcggtcagtctccaaacggaactggagaatttagtgcaatct
atggcacgcctccgtatggcaggaaagcaaaaatccgacgaatatgaggcattgaaaagt
agagccatagaagcaagagcagctattgcctctacaaaccaagaaatcaacgcctcggca
tcttcaacaagtggtttagacactttgataagagcaacctctgctgtagcttcggggtat
tctttagctcaaagtacagccgccttatttggtgcagaaaacgaagaagtagagcaaagt
attatgaaaattaccgctgcaatgtctgctcttcagtcattacagcagatacaagcagaa
ctaaaaaagtctgatagtcttgctactatagcacagacgaaagctcaaggtttatacacg
gcggtagtcgggagcagtacaggtgctttgaaaatttttcgtattgctttagcgagtaca
gggataggtttaataatcattctcctagcttcgctggttgcaaattgggataaagtcaca
gcaagtattaaaaaatcgtttcctgcccttaatagcttcggggataaactggataatatg
aaagcctatgttatgggctttctcaatgcctttttgtctctgtcaaaaacggtgctagat
actcttttaaaaattaaaaatgtcggttttaaaggagctttaaacaatcttaaaaatgca
aaatcggaagcagaaaaagcatttgagaatggcaaacagaatagcttaaacgcatcggca
caagacaagaaaaatgctcagcttgaaaaaagtttagaaatatacgataaggaaaccgaa
agactagaacacttaacaggtaaaaaacagtatgatagaagagaaaaatctatcaaagct
caactaagacttgttgataaaggttctaaggaagaggcagaacttatccataaaaaaaat
ctgttgctggcagataaggaaaaagaacgaaacgacgaggctaaaaaacaagcggacaaa
agacagaaagaggcagaaaaagcagctaaaaaagccgagcaattggcaagacaagaagca
gaggatagaaaggctgctaaagcaagtattgctcaagccgaaagggaatatcaaaagtcc
cgaatgatagccacggataaagaaatcgccgatatacaagataaatacgccaaacttcga
gcagaagcccaaaaagcaaaacttggagcaatggatatgatgcgtattgataacctagaa
aaagcagaaaccaaaagcgtaaccgagaaacatgccaatgagcaatttttcaaagaacta
gaagagcaaaaagaattgttcgcagcttacgaggtgtttaaaaccaaagtaggcaaagaa
gaggcagacaaacgctatcaaaatgaattgttggcgtttgagaattacggtgctttgcta
gatgcggaaatagaaaaaataaaagcattaggcgatgctttgacacctgagcaattccaa
aagttagaaaagctacaaagtgaaaagaaatcgtacgacaaagacaaaaacaaagaagcg
gagcaaaagtacgcagaggcttacaattccctattgtcgtttgatgataaacgccgagcg
atagataagaaataccaacaagataaggttctattgacccaaattacagatgagaaagta
agacaggctaagttagcagaactggagtttcagaaaaaggctgcattagatgccgtgaat
acagaagcctatgatagagaaactatcatgcaacgcctctctgaaaatctgatgggcatt
accagaagagagctaaataatagaatagcctcgctagaggaatatttggagaaagcagga
gaccatttagacgaaacacaaaaagagtttgtgcaaaacgaacttaaaaaagctaaagcg
gtaagagcgaccaccgatgtcggcgtagaggaaaaagtactgttgcaagaaaaagaagcg
atactcaaacgcattactgatttacaatctaaaggcattaccaatgtatccgatgagctg
aaacaactcgaagaggtcaatatgaaattaaaggatattctcgctaagaaatttgcgaaa
gtatccgaggttgcagggcagttaggtggagctttttcagagctaggtggagcattgaaa
gaatatgatgagggacttggcgacacggtagaaagtatgggagaactccttaatgtagcg
agtgatgttgcgggagcattggcggactttgcttcgggaccccaagggattgttggtggt
attatgaaaaccatcaaagctattacctctattttttctattggtgcaaaagcacgagag
agtgaaagaaaagcccaagagcaaattaaaaaatatcatgatgagatttttcagtctcaa
ctgaattataattctgaattaagaaaacgggttgccgaagaggttaaactcaacgacctt
tataaatcccgagttacaaatatccgagaggagttggaagccaatcgaaaaaatgcggag
agtataaaaaaagaccaagaagcggtttttaaaaggcttttgaatgccagaacggttaca
ggtatgcacacggaaaaatacggcggttttctaggtattggtagaaaaactagagccgta
gaagaaactagcagtgttgcaaaactgctaggcataggaaaatgggtagaaaaagaaatt
gccaaaatagcaggttggtctttaaaaataagagtatttgaacctggagaagttgaactt
acagataaaatatttgaggatttagaaaaactcaatgccgaaaaaccactcacgggcgat
gcaaaaacagcttacgagcaattgaaaaaactaagggaagaatacggctcaattgagaac
gctcgtagagagctagacaaacagctaagagaagcaataacagggactaccgctgatagt
atcgccgatagtataaagcagggtatcgcctcgggaaaaaagtcttttgcagattttgcg
gacgatattgagggctttttacgaaatgccgttttagcaggtttagaaaccgatgtgttt
agaaagaaaacacaggagctacacgaagtaatggaagaaatgttacaagatggcgtaatt
acatcggaagaaagagagcgatttaatcagctttatatggcgattgttgaggagagtaaa
cagaaagtggatatgctcaatcaagcgggcatcaatgtaattcaacagcaagaaagattg
aactctttacaaggagccataaaaggggcttcacaggaaagtatagatattctttcgggg
catttcgcaggcgtaagacttcatgtgatagagatagttaaaatgatgaaatctaacggt
accagcggactggaaaagctatcaaagctgatagaaatacaaatgaatattgaaagaaac
acccgaaaaacagcagaaaatacggaaaagctgcacgatatagatgagggtatttctaag
gtagaaaaagcaatcaaaggcaacggcaacgatgctaaaggtttagggttttaa
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