Riemerella anatipestifer CH3: M949_0334
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Entry
M949_0334 CDS
T03250
Name
(GenBank) tRNA pseudouridine synthase b
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rat
Riemerella anatipestifer CH3
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rat03016
]
M949_0334
Enzymes [BR:
rat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M949_0334
Transfer RNA biogenesis [BR:
rat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M949_0334
Prokaryotic type
M949_0334
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DUF276
Motif
Other DBs
NCBI-ProteinID:
AIH01505
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All DBs
Position
complement(334973..335671)
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AA seq
232 aa
AA seq
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MTLEEIQAGQVFLVDKPLDWTSFQAVNKMKFKLKREFKLKKIKIGHAGTLDPRATGLLVV
CTGKATKTIPEIQNAPKEYHAEIKIGVQTASYDTEEPEILPQDISTITKEQILETLDSFV
GEIDQTPPIFSAIKVDGERAYNLARAGEEVELKKRKTTIYFIDNIEIDLPFVRFSVGCSK
GTYIRSLAHDIGQALGVGAYLTQLRRTKIGDFSVEQASEQFLTNEFSFANDI
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacattagaagaaatacaagctggacaggtatttttggtagataagcctttggattgg
acttcctttcaggcggttaataagatgaaattcaaactaaaaagagagtttaagctaaag
aagattaaaattggtcatgcaggaacattagaccctagagccacagggcttttggtggtc
tgcacgggcaaggcaactaagactatcccagaaatacaaaatgctccaaaagagtatcac
gccgaaataaaaattggagttcagacggcttcttatgacaccgaagaaccagaaatatta
ccccaagatattagtaccatcactaaagagcaaattttagaaactttggatagctttgtg
ggagagatagaccaaacgccacccatattttctgcgattaaagtagatggcgaaagagca
tacaatcttgctagagcaggagaggaagtagaattgaagaagagaaaaaccaccatttac
tttatagataatatagagattgatttgccttttgtgaggtttagtgtggggtgttctaaa
gggacttatatccgaagtttagcacacgacataggtcaggctttaggcgtaggagcctac
cttacacagttgagaagaaccaaaattggtgatttttctgtggaacaggcttcggagcaa
tttttaacgaatgagtttagttttgctaatgatatttaa
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