Riemerella anatipestifer CH3: M949_0670
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Entry
M949_0670 CDS
T03250
Name
(GenBank) tRNA pseudouridine synthase a
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rat
Riemerella anatipestifer CH3
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rat03016
]
M949_0670
Enzymes [BR:
rat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
M949_0670
Transfer RNA biogenesis [BR:
rat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M949_0670
Prokaryotic type
M949_0670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AIH01841
LinkDB
All DBs
Position
complement(671533..672288)
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AA seq
251 aa
AA seq
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MSRYCIEFSYNGEKYFGYQIQPKQISVQETLEQALSTILREEIKTTGAGRTDTGVHAKKM
FAHFDTDLILEEELLPKRLNSFLPPDISVKRLFGVSSDFHARFDATYRTYEYYISLEKNP
FTQNSAWGYWRRPLNLEAMNEACKILFEYTDFTSFSKLNTDTKTNLCEIYKAFWVQEGTE
LKFTISANRFLRNMVRAIVGTMVDIGSGKIAPQDLRKVIEAKERNAAGTSAPAQGLFLVD
VGYNWERIFRN
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaagatattgcatagaattttcttacaatggcgaaaaatattttggttatcagata
caacctaagcagatttctgtgcaagaaaccttggagcaagcactttctaccattctaaga
gaagaaataaaaactacaggagcagggcgtaccgatacgggtgtacacgcaaagaaaatg
tttgctcattttgatacagatttaattttagaggaagagctattgcctaaaaggctcaat
agttttttgccaccagatatttcggtgaaacgattgtttggagtatctagtgattttcat
gcaaggtttgatgctacttacagaacttatgaatattatatttcgttagagaaaaatccg
tttacgcaaaattcggcgtggggctactggaggcgtccgctaaacttagaagcgatgaac
gaggcttgcaaaatcctttttgaatataccgattttacaagtttctctaaactaaacacc
gatactaaaactaacctctgcgaaatttataaagccttttgggtacaagagggtacagaa
cttaagtttaccatttctgccaatagatttttgcgaaatatggtaagggctatcgtgggg
acgatggtggatatagggagtggtaaaatagcaccacaagatttaagaaaggtaatagaa
gccaaagaaagaaatgcagcagggacttcggctcctgcacaaggattatttttggtagat
gtagggtataattgggagcggatttttagaaactaa
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