| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
rat Riemerella anatipestifer CH3
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:rat00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M949_0795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:rat03021]
M949_0795
03400 DNA repair and recombination proteins [BR:rat03400]
M949_0795
Enzymes [BR:rat01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M949_0795
Transcription machinery [BR:rat03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M949_0795
DNA repair and recombination proteins [BR:rat03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M949_0795
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(808942..813210)
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| AA seq |
1422 aa
MSNKNKTSRFNKISIGLASPESILQDSRGEVLKPETINYRTHKPERDGLFCEKIFGPVKD
YECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERIGHINLVVPVAHIWYFRSLPNKIGYL
LGLPSKKLDMIIYYERYVVIQQGIAKKLDGSDFEEMEFLTEEEYLDILDTLPTENQYLDD
SDPNKFIAKMGAEAVEELLKRIDLDALSYDLRHKAHNETSKQRRTEALKRLSVVEALRDA
NTRMINRPEWMVMRVLPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLLEIK
APEVILRNEKRMLQEAVDSLFDNTRKSSAVKSESNRPLKSLSDSLKGKQGRFRQNLLGKR
VDYSARSVIVVGPTLQLHECGIPKDMAAELYKPFIIRKLIERGIVKTVKSAKRIIDRKEP
VVYDILENVMKGHPVLLNRAPTLHRLGIQAFQPKMIEGKAIQLHPLVTTAFNADFDGDQM
AVHLPLGPEAILEAQLLMLGSQNILNPANGSPITVPSQDMVLGLYFMTKEAHSTEDYKVK
GEGLTFYSPEEVEIAYNEGQVTLNAKVKCKFPVKNENGELVTKLIETTVGRILFNQIVPE
QIGFINELLTKKSLRNVIGRILAETDFPTTVQFLDRMKDLGYSNAFKGGLSFSLADIVVP
EEKKQMIASAVESVDDIKANYNMGLITDTERYNQVIDVWTNTNANLTEMIMQRMKTDQGG
FNSVYMMLDSGARGSKEQIRQLSGMRGLMAKPQKAGSVGAEIIENPIVANFKEGLSILEY
FISTHGARKGLADTALKTADAGYLTRRLVDVAQDVIITEDDCGTLRGVEVTPLKKNDEIV
EKLSERILGRISLHDIYDPETDELIVEADVLIDEELAKKIEEAGIESVEVRSPLTCESKR
GICAKCYGRNLATGKMIHMGEAVGVIAAQSIGEPGTQLTLRTFHQGGTAGNVSENPSIVA
KRDGIVEMDEIRTVTSEDEEGNQAEIVVSRSTEFRLVADNASRTPIMVANLPYGSILSVK
PGDKVKKGDLIARWDPYNAVIIAETSGKVEYEDIIKGVSFQLEIDEQTGFEEKVISESRN
KKAVPTLRVVDSKGVEQKSYNLPVGAHLMVNDGEKIKAGKILIKIPRKSAKAGDITGGLP
RVTELFEARNPSNPAVVTEIDGVVSYGKIKRGNRELIVESKSGEIKKYLVKLSNQILVQE
NDFVRAGSPLSDGSVTPNDILAIKGPTAVQEYLVNEIQEVYRLQGVKIDDKHFEIIVRQM
MTKVEIVDGGDTQFLEGSLEHKQDFIEENERVFGMKVVTDPGDSQELKAGQMITARELRD
ENSKLKREDLKLVEVREALTATAHPVLQGITRAALQTKSFMSAASFQETTKVLNEAAVSG
KVDELNGLKENVIVGHRIPAGTGLKDYQNFIVGSNKEFEDLN |
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| NT seq |
4269 nt +upstreamnt +downstreamnt
atgtcaaataaaaataaaacaagtagatttaataaaatctcgataggtttagcttcacca
gagtctattttacaagattcaagaggagaagtattaaaaccagaaaccattaactataga
acgcacaaacctgaaagagacgggcttttctgtgagaaaatattcggtcctgtaaaggat
tacgagtgtgcttgtggaaaatataagcgtattcgttataaaggcattgtctgcgaccga
tgcggtgtagaagtaacggagaaaaaagtgcgtagagagcgtatagggcacatcaacttg
gtagttcctgtagctcatatttggtacttccgttctttaccaaataagataggttatctt
ctaggattgccatctaagaaactagatatgattatctactacgaaagatatgtggtaatt
cagcaaggtatcgctaaaaaattagacggttctgatttcgaggaaatggaatttttaacc
gaggaagaatatttagatattttagatacacttcctacggaaaatcaatacttagatgac
tctgaccctaataagtttatcgctaaaatgggagctgaggctgtggaagaattgttaaag
agaatagatttagatgctctttcttatgatttaagacacaaagcacacaacgagacatct
aagcaaagaagaacagaagcactaaaaagattatcagtagtagaagctcttagagatgct
aatacgagaatgattaaccgcccagagtggatggtaatgcgtgtacttcctgtaatacca
ccagagttaagaccattagtgccactagatggtgggcgttttgcgacatcagaccttaac
gacctttatagaagagtaattatcagaaacaatcgtcttaagagacttctagaaattaaa
gctcctgaagttatcttaagaaacgagaagcgtatgcttcaagaagcggtagattcttta
tttgataatacaagaaaatcttctgcagttaaatctgagtctaacagaccattaaaatct
ctttctgattcattaaaaggtaagcaagggcgtttccgtcagaacttacttggtaaaagg
gtggactactctgctcgttcggtaattgtggtaggtcctactttacaactacacgagtgt
ggtatccctaaagatatggcggcagagctttataagccgttcatcatcagaaaactaatc
gaaagaggtatcgtaaaaacagtaaaatctgcgaaaagaattatagatagaaaagaacct
gtggtgtatgacattctagaaaatgtaatgaaaggtcacccagtacttcttaaccgtgcc
cctacacttcaccgtttaggtattcaggcattccaacctaaaatgattgaaggtaaagcg
atacaactacacccattggtaactacggcattcaatgccgactttgatggtgaccagatg
gcggtacacttacctttaggtccagaagctattttagaggctcaacttttaatgttaggt
tctcagaatatcttgaaccctgctaatggttctccaattacggtaccttctcaggacatg
gtacttgggctttattttatgactaaagaagctcattctacggaggattataaagtgaag
ggagaaggtttaactttctactctccagaggaagtagaaattgcctacaacgaaggacaa
gtaacgcttaatgctaaagttaagtgtaaatttcctgtgaagaatgaaaacggagaatta
gtaactaaactgattgaaactactgttggtagaattttattcaatcagatagtacctgaa
caaataggattcatcaatgaacttttaacgaaaaaatcgttaagaaatgtaattggtaga
atcttagcagaaactgatttcccaactacagttcagttcttggatagaatgaaagactta
ggatactctaacgcatttaaaggaggtctatcgttcagcttagctgatattgtggtgcca
gaagagaagaaacaaatgatagcttcggcggtagaaagtgtagatgatattaaggctaac
tataatatgggtcttatcactgatactgagcgttataaccaagtaattgatgtttggaca
aatactaacgctaaccttaccgaaatgattatgcagagaatgaagaccgaccaaggtggt
ttcaattctgtatatatgatgctagattctggtgcgaggggttctaaagagcagattcgt
cagttatcaggtatgcgtggtctaatggcaaaacctcaaaaagcaggttcagtaggtgca
gagattatcgaaaaccctattgtagctaactttaaagaggggctttctatccttgagtac
tttatctctactcacggtgctcgtaaaggtcttgcggatacggcgcttaaaacggcggat
gctggttacttaacgagaaggttggtagatgtagctcaagacgttatcattactgaagac
gattgtggtactctaagaggtgtggaagtaacgccacttaaaaagaatgatgaaatagta
gagaaattatctgaaagaattttaggtagaatttctttacatgatatatatgacccagaa
acagacgagttaatcgtagaagctgatgttcttatagatgaagaattagctaagaagata
gaagaggctggtatagagtctgtggaggttcgttcacctttaacttgtgaatctaagaga
ggtatctgtgctaaatgttacggtagaaacttagctacaggtaagatgattcatatggga
gaagctgtgggtgttattgcagcacagtccatcggggaacctggtacacagcttaccttg
agaaccttccaccaagggggaacagcgggtaacgtttccgaaaatccatctatcgtagct
aagagagatggtatcgtagaaatggacgaaattagaacggtaacttctgaagatgaagaa
ggaaaccaagctgaaatcgtggtgtctcgttctaccgaattccgtttggtagcagataat
gctagcagaacacctataatggtagcaaacttaccttacggttcaatactttctgtaaaa
ccaggggataaagtgaagaaaggagaccttatagcaagatgggatccgtataatgcggta
atcattgctgaaacttctggtaaggtagagtacgaagatattatcaaaggcgtgtctttc
caattagaaattgacgaacagacaggctttgaagaaaaggtaatctctgaatctagaaac
aaaaaagcggtacctacccttagagtggtagattctaaaggagtagagcaaaaatcttac
aacttacctgtgggagctcacttaatggtaaatgatggagagaagattaaagctggtaag
attttaattaaaatcccaagaaaatctgcaaaagcaggggatatcacgggaggtcttcct
agagtaacggaacttttcgaagctagaaatccttctaatcctgcggtagtaacagaaatt
gacggggtagtatcttacggaaaaatcaagagaggtaaccgtgagcttatcgtagagtct
aaatcaggagaaattaagaaatacttggtgaagttatctaaccaaatcttagttcaagaa
aacgacttcgtaagagcaggttctccattgtcagatggttcagtaacgcctaatgatatt
ttagcaattaaaggtcctacagcggtacaagaatatttggtaaacgaaatccaagaggta
taccgtctacaaggggtgaagattgatgacaagcactttgaaatcatcgttcgccaaatg
atgacgaaagtagagattgtagatggtggagatactcagttcttagaaggtagtctagaa
cataagcaagactttatcgaagagaacgaaagagtgtttggtatgaaggtagttaccgat
ccaggagactctcaagagcttaaagcaggtcagatgattacagcgagagaattaagagac
gaaaactctaagcttaagagagaagacttaaaactggtagaagttcgtgaagcacttacg
gctacagcacaccctgttttacaaggtatcacaagagcggctctacaaactaagtcattt
atgtctgcggcatctttccaagaaactactaaggtacttaacgaagcagcggtatcaggt
aaagtagatgagttgaatggtcttaaagaaaatgtaattgtaggacatagaattcctgca
ggaacggggcttaaagattatcagaactttatcgtaggttctaataaagagtttgaagat
ttaaattaa |
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