Riemerella anatipestifer CH3: M949_0904
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Entry
M949_0904 CDS
T03250
Name
(GenBank) holliday junction DNA helicase ruvb
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rat
Riemerella anatipestifer CH3
Pathway
rat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M949_0904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rat03400
]
M949_0904
Enzymes [BR:
rat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M949_0904
DNA repair and recombination proteins [BR:
rat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M949_0904
RecFOR pathway proteins
M949_0904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
Mg_chelatase
AAA_16
TIP49
AAA_14
Rad17
TsaE
nSTAND3
NTPase_1
RNA_helicase
NB-ARC
NACHT
AAA_33
Bac_DnaA
AAA_18
NPHP3_N
AAA_17
AAA_24
ABC_tran
AAA_PrkA
AAA_11
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AIH02073
LinkDB
All DBs
Position
916676..917698
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AA seq
340 aa
AA seq
DB search
MPDFLHPDKENYSAEELLLEEQIRPQSFKDFAGQRRTLDNLEVFVAAAKKRGSALDHTLL
HGPPGLGKTTLAHIIANELGVGFKVTSGPVLDKPGSLAGLLTNLEENDVLFIDEIHRLSP
VVEEYLYSAMEDYKIDIMLETGPNARSVQINLNPFTLVGATTRSGMLTKPMLARFGIQSR
LEYYTVELLGMIIERSARVLGVPIYEDAALEIARRSRGTPRIANALLRRVRDFAEIKGNG
EIEIKITKFALDSLNVDEFGLDDMDNKIMRVMIENFKGKPVGISALATSIGENPETLEEV
YEPFLIQEGFIIRTPRGREVTDKAYQHLNINRTKNMGELF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgccagacttcttacatccagataaagaaaattattcagccgaagagcttttattagaa
gagcaaatacgccctcaatcgttcaaagattttgcgggacaaaggcgtactttagataat
ttagaagtctttgtagcggctgccaaaaaacgaggttctgcactagaccacacacttctg
cacggtcctccagggttaggaaaaaccactctagcccacattattgctaatgaattgggg
gtgggttttaaagtaacctctggtcctgtcttagacaaacctggaagtttagctggactt
cttaccaatttagaagaaaatgatgttcttttcatagacgaaatacaccgtttatctccc
gtagtagaagagtatctctattccgctatggaagattacaagatagatattatgctagaa
acaggacctaatgctcgttcagtgcaaatcaatcttaatccatttactttagttggagct
actacaagaagcggtatgcttaccaaaccaatgctagctagattcgggatacaatctaga
ttagagtactacacagtagaacttttaggtatgattatcgaaagaagtgctagagtgctt
ggcgttcctatttatgaagatgctgcactagagatagctagaagaagccgaggcactcct
agaattgcgaatgctctacttcgccgtgtgcgagattttgcagaaataaaaggcaatggt
gagatagaaataaagataaccaaattcgcactagattctctcaatgtagatgagtttggg
cttgatgatatggacaacaaaattatgagagtaatgatagagaacttcaaaggtaaacct
gtgggaatttctgcattagccacttccatcggagaaaatccagagactttggaagaagtt
tatgagccttttttaattcaagaaggattcatcatcagaacaccaagaggtcgagaagtt
accgataaggcttaccaacaccttaacatcaatagaactaaaaatatgggagagcttttc
taa
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