Riemerella anatipestifer CH3: M949_0950
Help
Entry
M949_0950 CDS
T03250
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rat
Riemerella anatipestifer CH3
Pathway
rat00280
Valine, leucine and isoleucine degradation
rat00650
Butanoate metabolism
rat00907
Pinene, camphor and geraniol degradation
rat01100
Metabolic pathways
rat01120
Microbial metabolism in diverse environments
rat04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
M949_0950
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
M949_0950
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
M949_0950
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
M949_0950
Enzymes [BR:
rat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
M949_0950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AIH02119
LinkDB
All DBs
Position
complement(963750..964598)
Genome browser
AA seq
282 aa
AA seq
DB search
MFLTECPRDAMQGWSEFIPTDTKINYLNSLMEVGFDVLDCGSFVSPKAIPQMADSGEVLD
NIDRSLSDTKLSVIVANIRGAEKALSHTNVDILGFPFSISETFQFRNTNKDQEEAFNQVE
TILEMVKSENKTLNLYFSMAFGNPYGEDWKWEDVAFWANRFSEIGVRNILLSDTTGVATA
ESITLLFDKIPANHPDISFGAHFHNRYEDSYIKLKAAYDKGCRRFDSAIKGIGGCPMAKD
DLVGNMPTEQLFNFMNLEKIEIKQNMLHFESAWNIAKSIFHF
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtttctaacagaatgtccgcgtgatgcaatgcaaggttggagtgagtttattccaaca
gatacaaaaatcaattaccttaatagtttaatggaggtagggtttgatgtgttggattgt
ggtagttttgtttctcctaaagccattccgcaaatggcagattctggagaagtgttggat
aatatagatagatctttatcagatactaaactttccgttattgtagccaatataagagga
gcggagaaagcactttctcacactaatgtggatattttaggatttcctttttctatatcc
gaaacctttcagtttagaaacaccaacaaagatcaagaggaagcattcaatcaagtggaa
accatcttagaaatggtaaaatctgagaataaaacacttaacctctacttttctatggca
ttcggaaatccatacggagaagattggaaatgggaagatgttgccttttgggcgaaccga
ttttcggaaataggagtcagaaatatattactttcggataccacaggggtagccactgcg
gaaagcattacacttttatttgataaaattcctgcgaatcaccctgatattagctttggt
gctcattttcataacagatacgaagattcttacattaaactaaaggctgcgtatgataaa
ggctgcagacgatttgattcagctataaaagggataggaggctgcccaatggctaaagat
gaccttgtaggaaatatgcctacagaacagcttttcaactttatgaatttagaaaagata
gaaattaagcagaatatgctccattttgaatctgcttggaatattgccaaatctattttc
catttttaa
DBGET
integrated database retrieval system