Riemerella anatipestifer CH3: M949_0976
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Entry
M949_0976 CDS
T03250
Name
(GenBank) TonB-dependent receptor plug
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
rat
Riemerella anatipestifer CH3
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rat02000
]
M949_0976
Transporters [BR:
rat02000
]
Other transporters
Pores ion channels [TC:
1
]
M949_0976
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AIH02145
LinkDB
All DBs
Position
complement(986018..988045)
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AA seq
675 aa
AA seq
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MKRTLFLLGSCFSISVFSQEADSAKSSKDIEEIVMTGTLKAVSRDKSPVPVEVFSAKFFE
KNPTPSIMESVEMINGVRPQLNCSVCNTGDIHINGLEGPYTLILIDGMPIVSSLSTVYGL
NGIPNSMIERVEVVKGPASSLYGSEAMGGIINIITKNVLTAPRLTLNLNSTSWGEHNTDI
GGKFRLSDKVSSLLSLNYFNFQNKIDKNKDNFTDAALQNRISVFNKWDFQRNEGRVASLA
LRYLNEDRFGGVLEWEKKYRGSDEVYGESIYTKRFEAIGTYQLPIKEKVVTQFSYNHHHQ
DSFYGDVPYLAKQSTAFGQIYWDKTLGKSDFLLGATVKNVYYDDNTPGTLSKDGTTNQPQ
NDWLPGIFAQNQWNINDKNTLLVGYRLDWSKVHGAIHSPRVAYKWNLAPQTNLRASFGTG
FRVVNLFTEDHAALTGSREVVISEALNPERSYNGNFNLTHKIYTSSGYINFDMIGFYSHF
TNKIIGDFDTNPNQIIYQNLRGYAVSKGVSLNTELKLGSPLTVNLGASYMEVYQKYEEDG
QTEILQQLFAPRWSGTYAVSYNFPKEWSADFTGAFYGPMRLPVLPNDFRPAHSPWYTLAN
IQIRKHFSKLGIEVYGGVKNLFNFTPKNPIIRPFDPFDTKVSEPSNPYGYTFDTEYGYAP
MLGIRGFVGLRYNIK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaacattatttttattaggtagttgctttagtataagcgttttttctcaagag
gcagactctgctaaatcttccaaggatatagaagaaatcgtaatgacgggtacgctaaag
gcggtaagtagagataaaagccctgtgccggtagaggtattttctgcaaaattttttgaa
aagaatcccactcccagtattatggagtcggtggaaatgattaacggtgtgcgtccgcaa
cttaattgttccgtttgtaatacgggagacattcacatcaatgggttagaaggaccatac
actttgattttaattgatggaatgccgattgtaagctctctttccacagtttacgggctt
aatggtatcccaaatagtatgatagaacgggtggaagtggttaaaggtccagcttcgtct
ctttacggttcggaagcgatgggaggtatcatcaatatcattactaaaaacgtacttaca
gcaccgcgtttaacgcttaatcttaactccacttcttggggcgaacacaatacggatatt
ggcggtaaatttagattaagcgataaggtatcctcgttattaagccttaattatttcaat
tttcaaaataaaatagataagaataaggacaactttaccgatgcggcactgcaaaaccga
atttcagtattcaataaatgggatttccaaagaaatgaaggaagagtggcgagtttggct
ttaaggtatctcaacgaagaccgttttggaggcgttttggaatgggagaaaaaataccga
gggagcgatgaagtttatggggagagtatttacaccaaaagatttgaagcgataggaact
tatcaacttccgataaaagaaaaggtggttactcaattttcgtataaccatcatcatcaa
gattcgttttatggcgatgtgccttatttggcgaagcaatctacggcgtttggacaaatc
tattgggataagactttgggtaaatctgattttttattgggggctaccgtcaaaaatgta
tattacgacgataatacgcctgggacactttctaaagacggaacaaccaatcaacctcaa
aacgattggctgccaggaatttttgctcaaaaccaatggaatatcaatgataaaaatact
ttattggtaggctaccgattagattggtccaaagttcacggagcgatacattcaccaaga
gtggcgtataaatggaatttggcaccacagactaatttgagagcgagttttgggacgggg
ttccgagtggtaaatctttttacggaagaccacgctgctcttacggggtctcgggaagtg
gttatttcggaagccttgaatcccgaacgctcctacaacggaaattttaatcttacccac
aaaatttacacttctagcggttacatcaattttgatatgataggattttattctcatttc
acgaataaaatcattggggattttgataccaatcccaaccaaattatttatcaaaatttg
aggggctatgctgtgagtaaaggcgtttcactgaatacagaattaaaattagggtcgccg
cttaccgttaatttgggagcgtcttatatggaggtgtatcagaaatatgaagaagatggg
caaacggaaatcctacagcagttatttgctcccagatggtcgggaacttatgcggtgagt
tataattttccaaaggaatggagcgccgattttacgggggctttttatggaccgatgcgt
ttgcctgtgttgcctaatgatttcaggccagcccattcgccttggtacactttagcgaat
attcagattagaaaacatttttctaaactcggaatagaggtgtatggaggcgtgaaaaac
ttgtttaattttactccgaaaaatcctattatacgaccttttgacccatttgatacaaaa
gtttcggagccaagcaacccgtatggttacacctttgataccgaatatggctatgctcca
atgttgggcatcagagggtttgtaggattgaggtataacattaaataa
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