Riemerella anatipestifer CH3: M949_1024
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Entry
M949_1024 CDS
T03250
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rat
Riemerella anatipestifer CH3
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rat03400
]
M949_1024
DNA repair and recombination proteins [BR:
rat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
M949_1024
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
ResIII
AAA
AAA_10
AAA_16
FtsK_SpoIIIE
AAA_7
AAA_19
Zot
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIH02193
LinkDB
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Position
complement(1035758..1037311)
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AA seq
517 aa
AA seq
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MADKTKFIEELNSRYSSKGESIILGKGMLDGEVVKEVDVKLPLKTLNRHGLIAGATGTGK
TKTIQVFVEQLSHAGVPSLVMDIKGDFSGIAEAGEENNIIKERYAKTELPYNAQSFPVEL
MTISGAKGVQLRATVTEFGPVLLSKILGLNDTQSSIMSIVFKYCDDKGLPLIDLEDLKKV
LQYVTTNDDGKKEISENYGSIASASLGAILRSIVALEQEGATAFFGEPSFEVNDLLQTRD
GKGVVNIMRVDDIQNKPNLFSTFMLSLFAEIYLTFPEEGDSGKPKLVLFIDEAHLIFKEA
SKTLLSQIETMVKLIRSKGVGIYFITQIPGDVPENVLSQLGLKIQHALRGFTAKDRKEIE
KAIQNYPVTEYYKAEELIQNLGIGEAFVTALDEKGIPTPLVQTYLISPESRMGVLTATEI
DNLTAKSALVKKYQNSIDKESAYEILSKRMVPATEESQASQEAPKTTVTKEQEEPSLFDT
ILKNPMAKTFGTTLMREGAKAILGMLGLKSTYRRRRY
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcagataagactaaatttatagaagaattaaacagcagatatagctctaaaggagaa
agtattattctagggaaaggtatgctagatggagaagtggtaaaagaggtagatgtaaaa
cttcctttaaaaactttgaaccgtcatgggttgatagcaggagctacaggcacagggaaa
accaagactatacaggtttttgtggaacagctttctcacgcgggggtgccatcattagta
atggatattaaaggggatttttcaggaattgcagaggcaggagaggaaaataacatcatc
aaagaacgctatgctaaaacagaactaccatataacgctcaatctttcccagtagagtta
atgacgatttcgggggcaaagggcgttcagttgagggctacggttacagagtttggaccg
gtgctacttagtaaaatattggggctcaacgatacccaaagtagtattatgtccatcgtt
tttaaatactgcgatgataaaggcttgcctctgatagatttagaagaccttaagaaggtg
ttgcaatatgtaacaacaaatgatgatggtaaaaaggagatttcggaaaattacggttct
attgcatcagcatcgttaggggctattttgaggtctattgtcgctttagaacaagaggga
gcaacagcgttctttggagagcctagctttgaggttaatgatttgctacaaactagagat
gggaaaggtgtggtaaatataatgcgtgtggacgatattcagaataaacctaacttattt
tctacctttatgctgtctttgtttgccgagatttatcttacattcccagaggaaggcgat
agtggtaaaccgaaactagtcctctttatagacgaagctcacttaatttttaaagaagcc
tccaaaaccttgctttcgcagatagaaactatggtaaaacttatccgttctaaaggagtt
ggtatttattttattacccaaatacctggagatgtgccagagaatgttttaagtcagttg
ggtcttaaaattcagcacgcattgagaggattcacagctaaagacagaaaagaaatagaa
aaagccatacaaaactatcctgttacagagtattataaggcggaagaactcatccaaaat
ttagggataggagaggcatttgtaactgcgttggacgagaaaggtatcccaaccccttta
gtgcagacttaccttatttcaccagaaagtagaatgggagtgctaactgctaccgagata
gataatctaacggcaaagtcagctttagttaagaaatatcagaatagtatagataaagaa
agtgcttacgagattttatctaaaagaatggttcctgcaactgaggaaagtcaggcgtct
caagaagcacctaaaacaaccgtgactaaagaacaagaagagcctagcctatttgatacc
atattaaaaaatcctatggctaaaacttttggtacaactttgatgagagaaggggctaaa
gccatactaggtatgcttggattaaaatctacttataggagaagaagatactag
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