Riemerella anatipestifer CH3: M949_1333
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Entry
M949_1333 CDS
T03250
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rat
Riemerella anatipestifer CH3
Pathway
rat00300
Lysine biosynthesis
rat00470
D-Amino acid metabolism
rat01100
Metabolic pathways
rat01110
Biosynthesis of secondary metabolites
rat01120
Microbial metabolism in diverse environments
rat01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M949_1333
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M949_1333
Enzymes [BR:
rat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
M949_1333
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
HP0268
Motif
Other DBs
NCBI-ProteinID:
AIH02501
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Position
1364943..1366145
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AA seq
400 aa
AA seq
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MITNQNLLSVAEEFGTPVYVYDAESIKQQYEKLTSSFSEKTRFFYAAKALTNINILKYVE
KLGASLDCVSINEVKLGLKAGFSKDRILFTPNSVDISEVEEAVELGVHINIDNISILEQF
GTKFGGSYPIFVRVNPHIFAGGNYKISTGHIDSKFGISIHQMRHIERVAKTTGLNVEGLH
MHTGSEIKDPDVFLQGLEIMFELAEHFPNLKYIDMGSGFKIPYQEGDMETDVKSLGKKVE
KALAKFNEEQGKELQLWFEPGKFLVGKCGHFLVKSNVIKQTTATVFVGVNSGFNHLIRPM
FYDSYHKIENLSNPNGPERIYTVVGNICETDTFAWDRKINEVREGDILVFRNAGAYGFEM
SSNFNSRLKPAEVFWLDGKAHLIRKRDEFEDLLRNQIEVI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgataactaatcagaatttgctgagtgtagcagaagaattcggtacacctgtgtatgta
tatgatgcagagtctattaagcaacaatatgaaaaattaacttcctcattttcggagaaa
acgagatttttctatgcagctaaggcacttacaaatatcaatatacttaaatatgtagaa
aagctaggcgcttctttagattgtgtgtctattaacgaagttaaactaggcttgaaggca
ggtttttctaaagataggattttgtttacacctaactctgtagatatatcggaggtagaa
gaggcggtagaattaggcgtacacatcaatattgataatatttctatcctagagcagttt
gggactaaatttggcggctcttaccctatttttgtaagggtaaatccgcatatttttgca
ggagggaattataaaatttctacagggcatatagattccaaatttggaatttctattcac
cagatgcgtcatattgagagagtcgctaagaccacaggacttaacgtggaggggctccat
atgcatacaggaagcgagattaaagaccctgatgtattcttacaaggtctagaaattatg
tttgagttggcggagcatttccctaatcttaagtatatagatatgggaagtggctttaaa
attccttatcaagaaggagatatggagactgatgttaaaagtcttggtaaaaaagtagaa
aaggctttagctaaatttaacgaagagcaaggtaaagaacttcaactttggtttgaacca
ggtaaatttttagtagggaaatgtgggcatttcttagtgaaatctaatgtaattaaacaa
accacagcaacggtgtttgttggagttaattctggattcaaccatttgattcgtccaatg
ttttatgattcttatcataaaatagaaaatttgtccaatcctaatggaccagagcgaatt
tatactgtggtaggaaatatctgcgaaacggatacatttgcttgggataggaaaataaac
gaagtgagagaaggtgatattttagtattcagaaatgcaggagcttatggttttgagatg
agttctaattttaactctagacttaagcctgcagaggtattttggttagatggtaaggct
cacttgataagaaaaagagatgagtttgaagacttattaagaaatcaaatagaggtaatt
taa
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