Riemerella anatipestifer CH3: M949_1530
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Entry
M949_1530 CDS
T03250
Name
(GenBank) DNA repair protein rada
KO
K04485
DNA repair protein RadA/Sms
Organism
rat
Riemerella anatipestifer CH3
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rat03400
]
M949_1530
DNA repair and recombination proteins [BR:
rat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M949_1530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ChlI
ATPase
Zn_ribbon_LapB
AAA_22
Lon_C
DnaB_C
DUF7125
AAA
AAA_24
CobU
nSTAND3
AAA_14
nSTAND_NTPase5
AAA_16
Rad51
AAA_5
RsgA_GTPase
Perilipin
NTPase_1
NACHT
SLFN-g3_helicase
ABC_tran
divDNAB
Viral_helicase1
Cas_APE2256
RuvB_N
RNA_helicase
DUF7129
AAA_29
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
AIH02697
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Position
1569511..1570860
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AA seq
449 aa
AA seq
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MAKLKTVYYCQNCGSQHSKWHGQCQNCGQWNTLVEEIAEKTTSKNYAGDFGRQHLINIIE
VETQAEQRIKTPSEELNRVLGGGIVLGSVTLIGGEPGIGKSTLLLQLALKMKKKILYVSG
EESASQIKMRADRLTELQNPNCFLYTETSIEKILHEAKKLQPDFMIVDSIQTLHSQVMES
SPGTVSQIRECASEVIKFAKVTNTPVFLVGHITKDGQIAGPKVLEHMVDVVLNFDGDRNH
LFRLLRANKNRFGSTAEIGIYEMISAGLKEIKNPSEVLITKKSEEFSGNAVAVTLEGNRP
MLLEIQALVSTAVYGTPQRSSTGFDAKRLNMLLAVLEKRSGFQLGAKDVFLNITGGIKTD
DPALDLAVVAAILSSNEDIAVSEHYCFAGEIGLSGEIRPVPQIEKRISEAEKLGYHKIFV
SKQNKIPKKKHNIKIVEVSKIEDFHEEIF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaattaaaaacagtatattattgtcagaattgtggttcgcaacattccaaatgg
cacggacaatgccaaaattgtggacaatggaacaccttagtggaagagattgctgagaaa
acaacctctaaaaattatgcaggagatttcggaaggcaacatctcatcaatatcatagaa
gtagaaacacaagccgagcaacgcattaaaactccaagcgaagaacttaacagggttttg
ggtggcggtattgttttaggttcggtaacccttattggcggagaaccaggtatagggaaa
tctacattactgttgcaattagcccttaaaatgaagaaaaaaattctctatgtttcgggg
gaagaaagtgcctctcaaatcaaaatgagagcagatagactaacggaacttcaaaatccg
aattgttttttatacaccgaaacttcaatagagaaaatcttacacgaagccaaaaaactt
cagcccgattttatgattgtggactctatacaaactttacattcgcaggtgatggaaagt
tccccaggtacggtgtctcagattagagaatgtgcttcagaagttataaagtttgcaaaa
gtgactaacacgcctgtttttttagtgggacatattactaaagatggacaaatagctgga
ccaaaagtattggagcatatggtagatgtggttcttaattttgatggtgatagaaaccat
ttgtttagacttttgagagcaaataaaaatcgttttggttctactgcggagattggtatt
tatgagatgatttcggcaggattgaaagaaattaaaaatccttcggaagtgcttattact
aaaaaatctgaggaattttcagggaatgcggtagcagtaacgctagaaggtaaccgccct
atgttgctagaaatacaagcccttgtaagtacagccgtgtatggcacaccacagagaagt
tctacgggttttgatgctaaaagacttaatatgcttttggcagttttagagaaacgctct
ggttttcaactcggggctaaagatgtattcttaaatattacaggaggtatcaaaacagac
gaccctgctctagatttggctgtagttgccgctatcttatcttccaacgaggatattgca
gtatcggaacattattgttttgctggggaaattggtcttagtggagaaattcgtcctgtg
ccacaaatagaaaaacgcatctccgaagccgaaaaattaggctatcataaaatttttgtt
tctaaacaaaataaaataccaaagaaaaaacacaatataaaaattgtggaagtttctaaa
atagaagactttcacgaagagatattttaa
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