Riemerella anatipestifer CH3: M949_1564
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Entry
M949_1564 CDS
T03250
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rat
Riemerella anatipestifer CH3
Pathway
rat00020
Citrate cycle (TCA cycle)
rat00190
Oxidative phosphorylation
rat00650
Butanoate metabolism
rat00720
Other carbon fixation pathways
rat01100
Metabolic pathways
rat01110
Biosynthesis of secondary metabolites
rat01120
Microbial metabolism in diverse environments
rat01200
Carbon metabolism
Module
rat_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rat_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
M949_1564
00650 Butanoate metabolism
M949_1564
09102 Energy metabolism
00190 Oxidative phosphorylation
M949_1564
00720 Other carbon fixation pathways
M949_1564
Enzymes [BR:
rat01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
M949_1564
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
GIDA
Pyr_redox_2
NAD_binding_8
RnlA_toxin_N
FAD_binding_3
Thi4
Lycopene_cycl
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AIH02731
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Position
1608079..1610091
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AA seq
670 aa
AA seq
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MSILDSKIPAGPLADKWKNHKNHMNLVAPNNRDKIDVIVVGTGLAGGSAAATLAEQGYNV
KAFCYQDSPRRAHSIAAQGGINAAKNYQGDGDSIYRLFYDTIKGGDYRAREANVYRLAEV
SANIIDQCVSQGVPFGRDYGGQLDNRSFGGVQVKRTFYAKGQTGQQLLLGAYSAMSRQIG
KGRIKMYNRHEMMELVIVDGKARGIIARNLVTGEIERHSAHAVVIASGGYGNVYFLSTNA
MGSNCSAAWKIHKKGAYFANPCFVQIHPTCIPVHGTQQSKLTLMSESLRNSGRIWVPKKI
EDAVAIREGKLRPENIKEEDRDYYLERRYPAFGNLVPRDVASRAAKERCDAGFGIENNET
KEGVYLDFSTEIMKKGKEAALERNLHNPTEQQIYDLGKAWVEEKYGNLFQMYEKITADNP
YKTPMKIYPAVHYSMGGVWVDYNLMSTIPGCFVIGEANFSDHGANRLGASALMQGLADGY
FVLPYTIADYLSADIRTGQIPTDTPAFEQAEKEIQEKVNFFINNNGTHSVDYFHKKLGNV
MWNKVGMARNEQGLKEAIQEIEEIRKDFWQNVRVPGEANGMNPELEKAFRVADFLELGQL
MAMDALNRNESCGGHFREEYSTPDGEAQRDDENYKYAAVWEYKGEDINQEVLHKEELVYE
NIEVKTRSYK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtatattagattctaaaattccagcaggtccattagcggacaagtggaaaaatcat
aaaaatcacatgaacctagtagcccctaacaaccgtgataagatagatgttatcgtggta
ggaacagggttagcaggtggttctgccgctgctactttagcagagcagggatataatgtg
aaggcattttgttatcaagattctcctagaagagctcactctattgcggctcaaggaggg
attaacgctgctaaaaactatcagggagatggagactctatctaccgattattctacgat
actattaaagggggagactaccgtgctagagaggctaatgtttatcgtctagcggaagtt
tctgctaatattatagaccaatgtgtttctcaaggagttccttttggaagagattacggg
ggtcaattggacaaccgttcttttggtggggttcaggtaaagagaactttctatgctaaa
ggacaaacaggtcagcaacttctactaggagcttattctgcgatgagccgtcagataggt
aaaggtagaattaaaatgtacaaccgtcatgaaatgatggagttggtaattgttgacgga
aaggcaagaggaattattgcaagaaacttagtaactggggagatagaaagacattctgca
cacgcagtagtcattgcttctggaggttatggtaatgtttatttcctttctacaaatgct
atggggtctaactgttctgcagcttggaaaatccataagaaaggagcttactttgcaaac
ccttgtttcgttcagatacaccctacttgtattcctgttcacgggacacagcaatctaaa
ttgacgttgatgtctgagtctttaagaaactctggtagaatatgggttcctaaaaagata
gaagatgctgtagccatcagagaaggtaaactaagacctgaaaatatcaaagaagaagat
agagactattatttagagagaagatatccagcgtttggtaacttagtgcctcgtgatgta
gcttctagagctgctaaagagcgttgtgatgctggttttggtatcgaaaataacgaaact
aaggaaggggtttacctagacttctctaccgaaataatgaagaaaggtaaggaagcggct
ttagaaagaaacctacataatcctactgagcaacaaatttacgatttaggtaaagcttgg
gtagaagagaagtatgggaacttattccaaatgtacgaaaagattacagcggataatccg
tataaaacgccaatgaagatttatccagcggtacactattctatgggtggtgtttgggta
gattataacttgatgtctacaataccaggttgtttcgtgattggtgaggctaacttctca
gaccacggtgctaacagacttggagcttctgctctaatgcaaggcttagctgatgggtac
ttcgtactgccttatacaatcgcagattatctttctgcggatattagaacagggcaaatt
cctacagatacaccagcttttgagcaagcagagaaagagatacaagagaaagttaatttc
ttcatcaataataacggaactcactctgtagattatttccacaagaaactaggaaatgta
atgtggaacaaggtgggtatggctagaaacgagcaaggcttgaaagaagctatccaagaa
attgaagaaattagaaaagatttctggcaaaatgtaagagttccaggggaagctaatggt
atgaatcctgaactagaaaaagcattccgtgtagcggatttcttggagctaggtcagctt
atggcgatggacgcacttaacagaaacgaatcttgcggaggacacttccgtgaagaatac
tctactccagacggagaagcacagagagatgatgagaactataagtatgctgcagtttgg
gaatataaaggagaggacatcaatcaggaagtcttgcacaaagaagaactggtttacgag
aatatagaagtgaaaacaagaagttataaataa
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