Riemerella anatipestifer CH3: M949_1590
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Entry
M949_1590 CDS
T03250
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rat
Riemerella anatipestifer CH3
Pathway
rat00260
Glycine, serine and threonine metabolism
rat00460
Cyanoamino acid metabolism
rat00630
Glyoxylate and dicarboxylate metabolism
rat00670
One carbon pool by folate
rat00680
Methane metabolism
rat01100
Metabolic pathways
rat01110
Biosynthesis of secondary metabolites
rat01120
Microbial metabolism in diverse environments
rat01200
Carbon metabolism
rat01230
Biosynthesis of amino acids
rat01240
Biosynthesis of cofactors
rat04981
Folate transport and metabolism
Module
rat_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
M949_1590
09102 Energy metabolism
00680 Methane metabolism
M949_1590
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
M949_1590
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
M949_1590
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
M949_1590
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
M949_1590
Enzymes [BR:
rat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
M949_1590
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AIH02757
LinkDB
All DBs
Position
1639597..1640865
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AA seq
422 aa
AA seq
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MRDVIFDLIEQERARQTHGIELIASENFVSDEVMKAMGSVLTNKYAEGYPGRRYYGGCEV
VDEVDKLAIDRAKQLFGVEYANVQPHSGSQANAAIYLACLKPGDTILGLDLSMGGHLTHG
SFVNFSGIQYNAQFYGVERETGLIDYEAMRQKALEVKPKLIIAGYSAYSRDLDYARFREV
ADEVGATLWADIAHPAGLVAKGLLSSPFPYCDVVTTTTHKTLRGPRGGLIMLGKDFENPY
GHKTPKGETKMMSAVLDSAVFPGIQGGPLEHVIAAKAVAFGEAIDGKFETYAKQVVANAR
ALSKSLIDRGFEIVGGGTDNHLMLVDLRNKGVNGKETEKALVKADITCNKNMVPFDDKSA
FITSGIRLGTPAITTRGLKESDMDSVAELISKVVSNLNNDSVLEEVKKEVNDLMSGRPLF
QH
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagagatgtaatttttgatttgatagagcaagaaagagcacgccaaacacatggtata
gagctaattgcttctgaaaactttgtttctgatgaagtgatgaaagctatgggaagtgtt
cttactaataaatacgctgaaggttatccaggaagacgctactatggtggttgtgaggta
gttgatgaagtagataaattagcgatagatagagcaaaacaactatttggggtagaatat
gctaacgttcagccacattctggttctcaagctaatgcagctatctatttagcatgtctt
aaacctggagatacaatattgggtctagatttatcaatgggagggcatttaacccatggt
tcgtttgttaacttttcgggaatacaatacaatgcacagttctacggtgtagaaagagaa
acaggactgatagattacgaagctatgcgtcagaaagctttagaggtaaaaccaaaactt
attatagcaggatattcggcgtattctcgtgatttagattatgctagatttcgtgaagta
gcagatgaggtaggtgctacactctgggcagatattgcacaccctgcaggattggtagct
aaaggtttattaagttctccgtttccttactgcgacgtggtaactactacgacacacaaa
actttaagaggtcctagaggaggtttgataatgctaggtaaagattttgaaaacccttat
ggtcataaaacgcctaaaggagaaaccaaaatgatgagtgctgtattggatagtgcggtg
tttccaggtatacaaggaggtccattagagcacgtgatagcagctaaagcagtagctttt
ggggaggcgatagatggtaaatttgaaacttatgctaaacaagtggtagctaacgcaaga
gcattgtctaaatctttgatagatagaggatttgaaattgtgggtggaggaacagataat
catcttatgttggtggatcttcgtaataaaggtgttaacggtaaagaaacagaaaaagcc
ctagtaaaagccgatattacttgtaataagaatatggtaccgtttgatgataagtcggcg
ttcattacttcaggtatcagattgggaactcctgcaattaccactagaggacttaaagaa
agtgatatggactctgtggctgaactaatttctaaagtggtttctaaccttaacaatgat
tctgttttagaggaagttaaaaaagaagtgaatgatttgatgtcaggaagaccattattt
cagcattga
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