Riemerella anatipestifer CH3: M949_1767
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Entry
M949_1767 CDS
T03250
Name
(GenBank) exodeoxyribonuclease iii xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rat
Riemerella anatipestifer CH3
Pathway
rat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M949_1767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rat03400
]
M949_1767
Enzymes [BR:
rat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
M949_1767
DNA repair and recombination proteins [BR:
rat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
M949_1767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Herpes_IE2_3
NERD_plant
Motif
Other DBs
NCBI-ProteinID:
AIH02934
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All DBs
Position
1820233..1820994
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AA seq
253 aa
AA seq
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MKIISYNVNGIRAAFNKDLIGWLGHAAPDVICFQESKAQKDQIDIASFEKEGYHTYWFSA
EKKGYSGVGIATKIQPKHIEYGCDMEPYDKEGRVIRADFEDFSVISVYVPSATNIDRLDF
KMQFCYDFLAYIKELRKTIPNLIISGDFNICHQAIDIHDPVRLKNVSGFLPIEREWMTEF
LKECGLIDSFRYFNTEPNQYSWWSYRQNARANNKGWRLDYHFVSDSLESRLSRGLILSEA
YHSDHCPILVELK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaagataatatcttataacgtcaatggtattcgggcagcttttaataaggatttaatc
ggttggttaggacatgctgctcccgatgttatttgttttcaggaaagcaaggctcaaaaa
gaccaaatagatatagcaagttttgaaaaagagggctaccatacctattggttttctgcg
gaaaagaaagggtatagcggggtaggtatcgctactaaaattcagcctaagcacatagaa
tatggttgtgatatggagccatacgataaagaaggacgagtgataagagctgattttgaa
gatttttcggtaatatctgtatatgtaccttccgctaccaatatagataggttggatttt
aaaatgcagttttgttacgattttttagcttatataaaagagctaagaaaaaccattcct
aatttaattatttcgggagattttaatatctgtcatcaagcaatagatatccacgaccct
gtaagattaaaaaatgtctctggttttcttcctatagaacgagaatggatgacagagttt
ttaaaagaatgtgggttaatagatagtttccgttattttaatactgaacctaaccaatac
tcgtggtggagttatagacaaaatgcacgagctaataataagggttggaggttagactat
cattttgtgtcagactcgttagaaagtcgtttgtctagagggcttattcttagtgaggct
tatcactcggaccattgccccattttagtggagttaaaataa
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