Riemerella anatipestifer CH3: M949_1817
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Entry
M949_1817 CDS
T03250
Name
(GenBank) sigma 54 interacting domain protein
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
rat
Riemerella anatipestifer CH3
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rat03110
]
M949_1817
Chaperones and folding catalysts [BR:
rat03110
]
Heat shock proteins
HSP100
M949_1817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
RuvB_N
MCM
AAA_5
Sigma54_activat
AAA_22
Mg_chelatase
zf-C4_ClpX
AAA_7
TIP49
NACHT
AAA_14
TsaE
ABC_tran
IstB_IS21
AAA_18
nSTAND3
PhoH
AAA_24
AAA_16
SKI
Sigma54_activ_2
RNA_helicase
DEAD
ResIII
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AIH02984
LinkDB
All DBs
Position
complement(1870848..1871969)
Genome browser
AA seq
373 aa
AA seq
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MLVSGQNGLICEHCIEQAHAFVKDNIQKEEFSPISTLSELKKPREIKKTLDEYVIGQDQA
KKQLSIAVYNHYKRLLHSSTKKDNDVEIEKSNIIMIGETGTGKTLLAKTIARELNVPFCI
VDATILTEAGYVGEDVESILSRLLMVADYDVEKAEKGIVFIDEIDKIARKSDNPSITRDV
SGEGVQQGLLKLLEGSIVNVPPQGGRKHPDQKYIQVNTQNILFIAGGAFDGIKEIIERRL
NKQAIGFSKEKLDSEKDLAQILPQVNSTDLRKFGLIPELLGRFPVITYLDQLTKETMVRI
MKEPKNSIVNQFKALFKIDGIDLEFTDEALEKIVDETFEKGLGARGLRGTTEKVLEDYMF
DIDIISKNKITIN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgttagtttcgggacaaaacggacttatctgcgaacattgtatagaacaagctcacgca
tttgttaaagacaatattcagaaagaagaattctctcctataagtaccctctccgaacta
aagaaacctagagaaattaaaaaaactctagacgaatatgtcatcggacaagaccaagct
aaaaaacaactttccatcgcagtctataaccattataaaagacttcttcactcttcaaca
aaaaaagacaatgatgttgaaatagaaaaatctaacatcattatgataggtgaaacaggc
acaggaaaaacccttttagcgaaaaccattgcaagagaacttaatgtccctttttgtatt
gtagacgctactatacttaccgaagctggttatgtaggcgaagatgtagagagtatttta
tctagacttcttatggtcgctgattacgatgtagagaaagccgaaaaaggcattgtattc
atagatgaaatagataaaatagcgagaaaatcagacaatccaagcatcacaagagatgta
tcaggagaaggtgtacaacaaggattattaaagttattggaaggaagcattgtaaatgta
ccgcctcaaggaggaagaaaacaccctgaccaaaaatacatacaagtaaacacacaaaat
atcctattcattgctggaggggcttttgatggtataaaagaaattatagaaaggagacta
aacaaacaagccataggctttagtaaagaaaaactagattccgaaaaagatttggcacag
atattgccacaagtaaactcaacggatttgagaaagttcggattaattccagaactttta
ggtagattccctgtaattacttatttagaccaactaaccaaagagaccatggtaagaata
atgaaagagccaaaaaactctattgttaatcaattcaaagctcttttcaaaatagacggt
atagatttagagttcacagacgaagccttagagaaaattgtagatgaaacttttgaaaaa
ggattaggtgcaagaggacttagaggcactacagaaaaggttttagaagattacatgttt
gatatagatataatatccaaaaataaaattacaataaattaa
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