Riemerella anatipestifer CH3: M949_1826
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Entry
M949_1826 CDS
T03250
Name
(GenBank) OmpA3
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rat
Riemerella anatipestifer CH3
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rat02000
]
M949_1826
Transporters [BR:
rat02000
]
Other transporters
Pores ion channels [TC:
1
]
M949_1826
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Ortholog
Paralog
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GFIT
Motif
Pfam:
OmpA
TSP_3
Motif
Other DBs
NCBI-ProteinID:
AIH02993
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All DBs
Position
1877717..1879180
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AA seq
487 aa
AA seq
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MKLNLASIALVLSFPAVLDAQVAVDTIGNKYPNTFSSWSSNVVPFTRNVKRFNDWSVSAG
IGIPFIQSADVTSIKNGNGKNLYGYSMYLSVDRALTHAFGLNLQYDRGETRQGAYNTKNT
GTGYAARTQYDAISLLGDINFSNLFRRIDNHSNYRWAIHGYAGVGTLAYRAYAEVNGGEQ
TLKTEIKPFKITSLFGQAGAGVKFKVSRRVDLESRLMYVVTGDDEFDGGGAQYSERNRRE
DQVSDNFFNATLGVSYKIGKHISHVMWHDPYQELYDKIELASVPPVVEVCKSGDADNDGV
CDDWDRQLDTPAGVRVDGAGVALDTDLDGVIDLHDKCVTVPGPVSNNGCPEEKQIVQQKL
EQEDEQIVAINKNFEGIEFDLNSDVIRTISFDKLDNAVAIMKTLRTDRQYLVIGATDTRG
SDAYNQKLSQRRAESVVRYLVGKGVPSYMLTAEGRGKKDLKYPECNPYTKCPEWKNEANR
RVYFKAK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatttagcaagtatagcattggtattatcgtttcctgctgttttagatgct
caagtggcggttgatacaataggaaataagtatccaaatactttttcttcgtggtcatca
aatgttgttccttttacgagaaatgttaaaaggtttaatgattggtctgtatcggcaggt
atagggattccttttattcaatcggctgatgttacctcaattaagaatggtaatggtaag
aatttgtatggttactcaatgtatcttagtgtagatagggctttaactcacgcttttgga
ttaaatcttcagtacgatagaggagaaactagacagggagcatacaacacaaagaataca
ggcacaggatatgcggctagaactcagtatgatgctatatccttgttaggagatattaat
ttttctaacttgtttagaagaatagataaccactctaattatagatgggctatacatggt
tatgcaggagttggtacattggcttatagagcttatgctgaggttaatggtggagagcaa
actttgaagactgagattaagccgtttaaaattacatctttattcgggcaagctggagca
ggagttaagtttaaggtttctaggagagtggatcttgaaagtaggctaatgtatgtagta
acgggagatgatgaatttgatggaggaggagcgcagtatagcgaaagaaatagaagagag
gatcaagtgtctgataatttcttcaatgcaacattaggagtttcttataagattggaaaa
cacatttctcatgtaatgtggcacgatccttatcaagagctttacgataaaatagagtta
gcatcagtacctccagttgttgaagtatgtaagagtggagatgctgataatgatggcgtt
tgtgatgattgggatagacaattagatactccagctggggttagagtagatggtgcaggt
gttgctttggatacagatttagatggtgtgatagacttacatgataagtgtgtaaccgtt
ccaggtccagtttctaataatggttgtccggaagaaaagcaaattgtccagcaaaaatta
gagcaagaagatgagcaaattgtagcaattaacaaaaactttgaggggatagaatttgac
cttaatagtgatgtaattagaactatatcttttgataagctagataacgctgtggctata
atgaagactttaagaactgatagacagtacttagtaattggtgctacagatactagagga
tctgatgcttataaccaaaaactatctcaaagaagagctgagtctgttgtgagatatctt
gttggaaaaggagttcctagctatatgttaactgctgagggtagaggtaaaaaggattta
aaatatccagaatgtaatccttatactaagtgtccagaatggaaaaatgaagctaacaga
agagtttactttaaagcaaaataa
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