Riemerella anatipestifer CH3: M949_1885
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Entry
M949_1885 CDS
T03250
Name
(GenBank) putative ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rat
Riemerella anatipestifer CH3
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rat03400
]
M949_1885
DNA repair and recombination proteins [BR:
rat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
M949_1885
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
ResIII
AAA_10
AAA
FtsK_SpoIIIE
AAA_16
AAA_7
AAA_19
Zot
AAA_30
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AIH03052
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Position
complement(1933908..1935533)
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AA seq
541 aa
AA seq
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MRLFKIDKRAIIQFYFLILSIKKCKMADKTKFIEELSSRYSSKGDSIILGKGMLDGEVIK
EVDVKLPLKTLNRHGLIAGATGTGKTKTIQVFVEQLSHAGIPSLVMDIKGDFSGIAEAGE
ENNIIKERYAKTELPYKAQPFPVELMTISGAKGVQLRATVTEFGPVLLSKILGLNDTQSS
IMSIVFKYCDDKGLPLIDLEDIKKVLQYVTTDDNGKKEIAENYGSIAPASLGAILRSIVA
LEQEGATAFFGEPSFEVNDLLQTRDGKGVVNIMRVDDIQNKPNLFSTFMLSLFAEIYLTF
PEEGDSGKPKLVLFIDEAHLIFKEASKTLLSQIETMVKLIRSKGVGIYFITQIPGDVPEN
VLSQLGLKIQHALRGFTAKDRKEIEKAIQNYPVTEYYKAEELIQNLGIGEAFVTALDEKG
IPTPLVQTYLISPESRMGVLTATEIDNLTAGSALVKKYQNSIDKENAYEILSKRMVPVAE
GSQASQEAPKTTVTKEQEEPSLFDTVLKSPMAKTFGTTLMREGAKAILGMLGLKSTSRRR
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagattatttaagatagataaaagagctattattcagttttatttcttaattttatcc
atcaaaaaatgtaaaatggcagacaaaactaaatttatagaagaactaagcagtagatat
agctccaaaggagatagtattatcctagggaagggaatgctagatggagaggtaataaaa
gaggtagatgtaaaacttccgttaaaaaccttaaaccgtcatggtcttatagctggggct
acaggaacgggaaaaacgaagactatacaggtctttgtggagcagctttctcatgcaggg
ataccgtctttagtaatggatattaaaggtgatttttcaggaatagcagaggctggggag
gaaaataacatcattaaagaacgctatgctaaaacagagttgccgtataaagctcagcct
tttccggtagagttaatgacgatttctggggctaaaggtgttcagttgagggctacggtt
acagaatttggaccagtgctacttagtaaaatattggggcttaatgatacccaaagtagc
attatgtctatagtctttaaatattgtgatgataaaggcttacctctaattgatttagaa
gatattaaaaaagtattacagtatgtaactacggacgataatggtaagaaagaaatagca
gaaaattacggctctattgcaccagcatctttaggggctattttgaggtctattgtagct
ttagaacaagagggagcaacagcgttctttggtgagccgagctttgaggttaatgatttg
ttacaaactagagatgggaaaggtgtggtaaatattatgcgtgtagatgacattcagaat
aaaccgaacttattttctacctttatgctgtctttgtttgccgagatttatcttactttt
ccagaagaaggcgatagtggaaaaccgaaattggtgctttttatagatgaagctcactta
atttttaaagaagcctccaaaaccttgctttcacagatagaaactatggtgaaacttatc
cgttctaaaggagttggtatttattttattactcaaatccctggagatgtgccagagaat
gttttaagtcagttaggtcttaagattcagcatgcattgagaggatttacagctaaagat
agaaaagaaatagaaaaagccatacaaaactatcctgttacagagtattataaggcggag
gaactcatccaaaatttaggaataggagaggcgtttgtaacggcattagatgaaaaaggt
atcccaacacctttggtgcaaacttaccttatttcaccagaaagtagaatgggagtatta
acggctaccgagatagataatctaacggcagggtcagctttagttaagaaatatcagaat
agtatagataaagaaaatgcttacgagattttatctaaaagaatggttcctgtagctgag
ggaagtcaggcgtctcaagaagcacctaaaacaaccgtgactaaagaacaagaagaacct
agcctatttgatactgtattgaaaagtcctatggctaaaacttttggtacaactttaatg
agagaaggagcaaaagctatactaggtatgcttggattaaaatccacttctaggagaagg
tactaa
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