Riemerella anatipestifer CH3: M949_1974
Help
Entry
M949_1974 CDS
T03250
Name
(GenBank) primosomal protein n'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rat
Riemerella anatipestifer CH3
Pathway
rat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M949_1974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rat03400
]
M949_1974
Enzymes [BR:
rat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M949_1974
DNA repair and recombination proteins [BR:
rat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M949_1974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
nSTAND3
Cas3-like_C_2
AAA_19
AAA_7
zf-MYND
NPHP3_N
SIR2
Motif
Other DBs
NCBI-ProteinID:
AIH03141
LinkDB
All DBs
Position
complement(2014280..2016739)
Genome browser
AA seq
819 aa
AA seq
DB search
MSPSMLYAQVILPLNLKGTFTYKVPIDLQDKIALGMRVLVPFRGKKIYTGIISDLHQNTP
EEFSPKEIYSILDDTPILPLPQLEFWQWLSSYYLCNLGEIYRLAFPSSLKLESETYLKLK
PNANIDYELLDANEILLIQALEVQQLVNLSEMEAFIPKKNLIKTINALIDMHYIEIDEKV
AEKYKVKEVAYVKIKEELLGNQSLAEVISSLNRAEKQKELFLLILSKQTTSPEVPIKKSI
LFEEGNFAHAQMKALIDKDLVDEYYLQHDRLETYNGDIEDLEPLTETQNNTFKAIEQSFA
QNQKVLLHGVTSSGKTHIYIHLIEQLIKENKNTLLLLPEIALTKQIIRRLEKKYGDLIGF
YHQKLTDFERVEVWRKVKLNKIKVLIGTRNALFLPYQNLDLVIVDEEHDSAYKPREASPY
FNAKDAAQILAHHYKAHLLLGSATPSLESYYAAQKGKLKYLYLGERYGNVDLPDFEIINI
KEEQETKTINGNFSAALIQKIQENLEKNKQIIILHNRRGYANVVECEACGYVTYCSNCDV
VMTYHKSSNEMKCHYCGQRASKPNQCPRCQSQQLNTKGVGVEQVAEEVKRLFPEAEVDRM
DIDSMRKKFAYEKLYEKIENRETNIIVGTQMISKGLDFDHIDLVAIPKADALLYVQDFRA
EEKAYQLITQVSGRAGRTSGKGKIIIQTYNPTHPLFSLIKHNSTQEIYEHFLNDRKKFLY
PPFTKVVLLEIKHSKEGKADRASQFLGSILRKYLPLDCVLGPEKAPIAKLKNKYQFQILL
KLPRNNKYFTFKEYISQSLDEFREISAYQSVKIELFVDF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccctctatgctttacgctcaagtcatactaccacttaatttaaaaggaactttc
acttacaaagttcccattgatttacaggataaaatagcgttgggtatgcgcgttcttgtt
ccgtttagaggaaagaagatctatactggaattatctcagaccttcaccaaaacactccc
gaagagttttctccaaaagaaatttacagcattttagacgacacccctattttacctctc
ccacagcttgagttttggcaatggctatcttcttactatctgtgtaatttaggcgaaatt
taccgtttagcatttccttcatcattaaaattggagagtgagacttatctaaaactcaaa
ccaaatgctaacatagattatgaacttctagatgccaacgaaatacttttaatacaagcg
ttggaagtccaacaattggtcaatctttctgaaatggaagcctttattccgaagaaaaat
ttaattaaaaccatcaacgctcttatagatatgcactatatagagatagatgaaaaagtg
gcagaaaagtacaaagtaaaggaggtagcttatgtaaaaattaaagaggaattgctaggc
aatcagtctttagcagaggttatttctagccttaatagagcggaaaaacaaaaagaactt
ttcctgctcattttgtctaaacaaacgacttcgcctgaagttcctattaaaaaatctatt
ttgtttgaggaaggtaatttcgctcacgcccaaatgaaagctctgatagataaagatcta
gtagatgaatattacctccagcacgaccgactagagacttacaatggtgatatagaagac
cttgaacctcttactgaaactcaaaacaacacatttaaagcaatagaacagtcttttgct
caaaatcagaaagtattattacacggcgtaacttcttcagggaaaacccacatctatatc
cacttgatagagcaactcatcaaagagaataaaaacacattattattactaccagaaatt
gcattaaccaagcaaattatccgtaggctagaaaagaaatatggcgatttaattggcttt
tatcatcaaaaactcaccgattttgaacgagtggaagtttggcgaaaagtaaaactcaac
aagattaaagtccttattggaactagaaacgcattgtttctgccctaccaaaatttagat
ttagtaattgtagatgaagaacacgattctgcctacaaacctagagaagctagcccttac
tttaatgctaaagatgcagctcaaatcctagctcatcattataaagcacatctactgctc
ggctctgccacgccatctttagaatcttattacgctgcacaaaaaggaaaacttaagtac
ctttatttaggcgaacgatacggcaatgtagatttaccagattttgaaatcatcaatatt
aaagaagaacaagagactaaaactataaatgggaatttttcggcagcgttaattcaaaaa
attcaggaaaatttagagaagaacaaacaaattattatcctccataacagaagaggctat
gccaatgtagtagaatgtgaggcttgtggatacgtaacctattgctctaactgtgatgtg
gtaatgacctatcacaaatcttctaacgaaatgaagtgccattattgcggacaaagagct
tctaaacccaaccaatgtcctaggtgccagtctcaacaactcaataccaaaggggttggt
gtagaacaagtggcggaggaagtcaaaagattgtttccagaggcagaagtggacagaatg
gacatagactctatgagaaaaaaattcgcctatgaaaaactctacgaaaaaatagaaaac
agagaaaccaacatcattgttggcacacagatgatttctaaaggtttagactttgaccat
atagacctagtggcaattcccaaggctgatgcactcctatatgtacaagatttccgagcg
gaagaaaaagcctaccagctcatcactcaagtatctgggagagcagggagaacttcagga
aaaggtaagattattatacaaacttacaacccaacacaccctttgtttagcttgattaag
cacaatagcactcaagaaatctatgagcattttctaaatgatagaaaaaaattcctctat
ccaccatttaccaaagtagtacttttagaaattaaacattccaaagaaggcaaggcagat
agagcttcacaatttttaggttctatccttaggaaataccttcctttagactgtgtttta
ggtccagaaaaggctcctatcgcaaagctgaaaaacaaatatcagttccaaatattactc
aaactgcctagaaataataaatacttcactttcaaagagtacatttcacaatcattggac
gagttcagagaaatctccgcttatcaatctgtgaaaatagagttatttgtagatttttaa
DBGET
integrated database retrieval system
