Riemerella anatipestifer CH3: M949_2014
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Entry
M949_2014 CDS
T03250
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rat
Riemerella anatipestifer CH3
Pathway
rat00730
Thiamine metabolism
rat01100
Metabolic pathways
rat01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rat00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
M949_2014
Enzymes [BR:
rat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
M949_2014
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
AIH03181
LinkDB
All DBs
Position
complement(2053598..2054908)
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AA seq
436 aa
AA seq
DB search
MITPEFVRDEVAKGRAVIPCNINHPESEPMIIGRNFLVKINANIGNSAVTSSIEEEVEKS
VWACRWGADTIMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVNGKAEDLTWEIFR
DTLIEQAEQGVDYFTIHAGVRLKYIPHTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHF
EEICEIMKAYDVAFSLGDGLRPGSIADANDYPQFAELETLGELTKIAWKHDVQCIIEGPG
HIPMHMIKENMDKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGCAMLCYV
TPKEHLGLPNKEDVKTGVITYKIAAHAADLAKGHPGAQHRDNAMSKARFEFRWEDQFNLA
LDPDTAREFHDETLPSENAKVAHFCSMCGPHFCSMKITQEVRNYAEENGLDTLEAIEKGM
QQKSEEFKEKGGEVYL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgattaccccagagtttgtgcgtgatgaagtagctaaaggaagagccgttatcccttgt
aacatcaatcaccccgaaagcgaaccgatgattattggtcggaatttcttagtaaaaatc
aatgcgaatattgggaactccgcagtaacctcgtctattgaggaagaagtagaaaaatcc
gtttgggcgtgtcgctggggagcagataccattatggatttatccacagggaaaaatatc
cacgaaactcgtgaatggattttacgcaactcccccgtccctattggtacagttcctatt
tatcaagccttagagaaggttaacgggaaggcggaagacctcacctgggaaatctttaga
gatacccttatagaacaagccgaacaaggagtagattatttcactattcacgcaggagtt
cgtttaaaatatatccctcataccgccaaaagagttacaggaattgtatcgcgtggaggg
tctataatggcaaaatggtgtttggctcatcacaaagaaaatttcttatacacccatttt
gaagagatttgcgaaataatgaaagcttacgatgttgctttttctttgggagacgggcta
cgccctggtagtattgccgatgctaacgactatccacaatttgcggaattagaaacctta
ggagaacttaccaaaatcgcttggaagcacgatgtacaatgcattattgaaggtcctgga
catatcccaatgcatatgattaaagaaaatatggacaaacagctagaagcgtgtggcgaa
gctccattctacactttaggacctctaactaccgatattgctcctggctacgaccatatt
accagcggaattggtgctgcaatgattggctggtacggctgtgcaatgctttgctatgta
acacccaaggaacatttaggattacccaacaaagaagatgtaaaaacaggagtcatcact
tataaaattgcagcccacgcagcagatttagcaaagggacaccctggagctcagcatcgg
gacaatgctatgagtaaagcacgatttgagttccgttgggaagaccaattcaacttagca
ctagaccctgataccgctcgtgaatttcacgatgaaacgctaccatctgaaaacgccaaa
gtggctcacttctgttcaatgtgtggacctcatttctgttcaatgaaaatcacccaagaa
gtgcgtaactatgccgaagaaaacggtctggataccctagaagccattgaaaaaggtatg
caacaaaaatcggaagagtttaaagaaaaaggaggcgaagtctatttgtaa
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