Rathayibacter sp. VKM Ac-2759: GSU68_05835
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Entry
GSU68_05835 CDS
T10520
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rath Rathayibacter sp. VKM Ac-2759
Pathway
rath03420
Nucleotide excision repair
rath03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GSU68_05835
03430 Mismatch repair
GSU68_05835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rath03400
]
GSU68_05835
Enzymes [BR:
rath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSU68_05835
DNA repair and recombination proteins [BR:
rath03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSU68_05835
MMR (mismatch excision repair)
Other MMR factors
GSU68_05835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QHC66149
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All DBs
Position
1286428..1289640
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AA seq
1070 aa
AA seq
DB search
MIDALTIAERLDLRPPTAEQRAVIEAPLEPALVVAGAGSGKTETMANRVLWLLANGLAAP
SDVLGLTFTRKAAAELGERIGRRIDQLGAAGLLPLAPGQSEPDPFEAATVSTYNAFANTI
FRDNAALIGREGDATVLSEASAWHLARGVVADTVDPRILEVEASLDRLTDLVVSLAHDLA
DNLADPVAVAAFAEDFLRLGELPRGSSGSGMYRELERALQAVGALPILTSLAERFQEAKA
DRGFVEFSDQVALALRITERVPRIVDEHRARYRVVLLDEYQDTSVLQTRLLARLFAEQGV
MAVGDPHQSIYGWRGASAEGLGRFAVDFGSAHRFSLSTSWRNGHGVLAAANAIVAPLAVG
SAVPVDRLAAGPGASGHPVELTFPETIDEEADDVARWFAGRLAETPEPPSAAALFRVRAH
MDRFAAALSRHGVRYHILGIGGLLRQPEIADLVAALTVVEDPAAGSELVRLLAGARWRLG
VRDLKALRDLASWLASRDHAHRLLPEEVRERMRASVTEGEGGSIVEALDFIASRRPGEDG
LLDHSALGAFSEEGLRRLHDAGTLFARLRSRAGLDLLDFVTLVEQELGLDIEVEANETRG
DGRANLEAFREAAAGYLQTDDRGAGTGSSLRGFLRWLVLADKRDGLAPRPEDPEPGTVQL
LTIHGSKGLEWDLVAVPRLVDGELPGTPIEGFRGWVRLGAMPYAFRGDAAELPDLAWQGC
TTQKEVVDAMTAFGDTLRERNESEERRLAYVAVTRARHHLLLSGSWWAGQSKPRGPGVFL
RDLEAADTIPELPAEPQNLENPLEQAPRTFRWPHDPLGARGDRVRAAAERVRVAEPALLG
ARGDDIRLLLAERAVRLGGGERVALPTRIPASRFKDIVSSPAEVTAQLRRPMPERPYRQT
RLGTTFHSWVENRFGIQGGAEAVDTFPDEIDDAGETSVEQERLSALIATFERSEWADRRP
EAVEIEIHLQLAGHVVVCKLDAVYPTAEGYQIVDWKTGRAPRDAADLELKQFQLALYRLA
FSRWRGVPLESVDAVFYFVADDLVLRPERFYSERELAESLSSATGASPRP
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgccctcaccatcgccgagcgcctcgacctgcgcccgcccaccgccgagcag
cgggccgtcatcgaggctccgctcgagccggccctcgtggtcgcgggagcgggcagcggc
aagaccgagacgatggcgaaccgggtgctgtggctcctggccaacgggctcgcggctccg
tccgacgtcctcgggctgaccttcaccaggaaggccgccgccgagctcggcgagcgcatc
ggccgccgcatcgatcagctcggagcggcgggactgctgccgctcgcgcccgggcagtcc
gagcccgatccgttcgaggcggcgaccgtctcgacctacaacgccttcgccaacacgatc
ttccgcgacaacgcggcgctcatcgggcgcgagggcgatgcgaccgtcctgtccgaggcg
tcggcctggcacctggcccgcggcgtcgtcgccgacacggtcgacccgcggatcctcgag
gtcgaggcgagcctcgaccggctcaccgacctggtcgtgtccctcgcgcacgacctcgcc
gacaacctcgccgacccggtcgccgtcgccgccttcgccgaggacttcctccggctcggc
gagctgccccgcggctcgagcggcagcgggatgtaccgcgagctcgagcgggcgctccag
gcggtcggggcgctgccgatcctgacgtcgctcgccgagcggttccaggaggcgaaggcc
gatcgcggcttcgtcgagttctcggaccaggtcgcgctcgcgctgcgcatcaccgagcgc
gtgccgcggatcgtcgacgagcaccgagcccgctaccgcgtcgtgctcctcgacgagtac
caggacacctccgtcctccagacgcggctgctcgcccggctcttcgccgagcagggcgtg
atggccgtgggcgacccgcaccagtcgatctacggctggcggggcgcgagcgccgaggga
ctcgggcgcttcgcggtcgacttcggctcggcgcaccgcttctccctctcgacgagctgg
cgcaacggccacggggtcctcgccgcggcgaacgcgatcgtcgcgcccctcgcggtcggc
agcgccgtccccgtcgaccggctcgccgccggccccggagcgagcgggcaccccgtcgag
ctgaccttccccgagacgatcgacgaggaggccgacgacgtcgcccgctggttcgccggg
cggctggccgagaccccggagccgccctcggcggcggcgctgttccgcgtccgcgcccac
atggaccgcttcgccgcggctctgtcgcggcacggcgtccggtatcacatcctcgggatc
ggcggcctgctgcggcagcccgagatcgccgacctggtcgccgcgctgacggtcgtcgag
gatccggcagccggcagcgagctcgtgcgcctgctcgccggcgcgcgctggcggctcggc
gtgcgcgacctcaaggcgctgcgcgacctcgcctcctggctcgcctcgcgcgatcacgcg
caccgcctgctgccggaggaggtccgcgagcggatgcgcgcctccgtcaccgagggcgag
ggcggctcgatcgtcgaggctctcgacttcatcgcctcgcgccgcccgggggaggacggc
ctgctcgaccactccgccctcggcgcgttcagcgaggaggggctgcggcgcctgcacgac
gcgggcacgctgttcgcccgcctccgaagccgcgccgggctcgacctgctcgacttcgtg
accctcgtcgagcaggagctaggcctcgacatcgaggtggaggccaacgagacccgtggc
gacggccgcgccaacctcgaggcgttccgcgaggcggcggcgggatacctgcagaccgac
gaccgcggggcgggcaccggatcctcgctccgcggcttcctccgctggctcgtcctcgcc
gacaagcgcgacggcctcgccccgcgtccggaggacccggagccgggcaccgtgcagctg
ctcacgatccacggctcgaagggcctcgagtgggatctcgtcgcggtgccccggctcgtc
gacggcgagctcccgggcacgccgatcgagggcttccgcggctgggtgcgactcggggcg
atgccctacgccttccgcggcgacgcggccgagctgcccgacctcgcctggcagggctgc
acgacgcagaaggaggtcgtcgacgcgatgaccgcgttcggcgacaccctgcgcgagcgc
aacgagtcggaggagcgccgcctcgcgtacgtcgccgtcacccgcgcccggcaccacctg
ctcctcagcggctcgtggtgggccggtcagtccaagccccgggggccgggggtgttcctc
cgcgatctggaggccgccgacaccatcccggagctgccggccgagcctcagaacctcgag
aacccgctcgagcaggcgccgcgcaccttccgctggccgcacgaccccctgggcgcccgc
ggcgaccgggtccgcgccgccgccgagcgggtccgggtcgccgagcccgcgctcctcggc
gcgcgcggcgacgacatccggctcctgctcgccgagcgggcggtgcgcctgggcggagga
gagcgcgtcgccctccccacccgcatccccgcctcgcgcttcaaggacatcgtgagcagc
cccgccgaggtcaccgcccagctgcgccggccgatgcccgagcggccctaccggcagacc
cggctcggcacgaccttccactcctgggtcgagaaccgcttcggcatccagggcggagcc
gaggccgtcgacaccttccccgacgagatcgacgacgcgggcgagacgagtgtcgagcag
gagcggttgtccgcgctgatcgcgaccttcgagcgctcggagtgggccgaccgccggccg
gaggccgtcgagatcgagatccacctgcagctcgccgggcacgtcgtcgtctgcaagctc
gacgccgtctacccgaccgcggaggggtaccagatcgtcgactggaagaccggccgcgca
cctcgggacgcggccgatctcgagctcaagcagttccagctcgcgctctaccgcctggcc
ttctcccgctggcgcggggtcccgctcgagagcgtcgacgccgtgttctacttcgtcgcc
gacgacctcgtgctgcgtcccgagcgcttctactcggagcgggagctcgcggagtcgctg
tcctcggccacgggggcgagcccgcgcccgtga
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