Rathayibacter sp. VKM Ac-2759: GSU68_07705
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Entry
GSU68_07705 CDS
T10520
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rath Rathayibacter sp. VKM Ac-2759
Pathway
rath00061
Fatty acid biosynthesis
rath00071
Fatty acid degradation
rath01100
Metabolic pathways
rath01212
Fatty acid metabolism
rath02024
Quorum sensing
rath04146
Peroxisome
Module
rath_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rath00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GSU68_07705
00071 Fatty acid degradation
GSU68_07705
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GSU68_07705
09145 Cellular community - prokaryotes
02024 Quorum sensing
GSU68_07705
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rath01004
]
GSU68_07705
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rath04147
]
GSU68_07705
Enzymes [BR:
rath01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GSU68_07705
Lipid biosynthesis proteins [BR:
rath01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GSU68_07705
Exosome [BR:
rath04147
]
Exosomal proteins
Exosomal proteins of breast milk
GSU68_07705
Exosomal proteins of breast cancer cells
GSU68_07705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AraC_N
Motif
Other DBs
NCBI-ProteinID:
QHC66473
UniProt:
A0A6P1FAZ0
LinkDB
All DBs
Position
complement(1677301..1679124)
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AA seq
607 aa
AA seq
DB search
MEQFDSPLVVAADPHANTTALLLDRVRESPDRPLFALPDGDGWRDVTAQQFLDQVVALAK
GFVASGIEPGEKIGLICKTRYEWTLIDFAVWFAGGVLVPVYETSSPAQVQWNLADSGAHA
VIVETADHFARFDEVRADLPEVRTAWQIGLGDLDKLARRGVDVPDAEIERRRSLATGSDI
ATIIYTSGSTGRPKGCIIRHSNFVELSRNSAVALTELIHQPGASTLLFITTAHVFARFIS
ILCVHGGVKVGHQADTKQLLPSLGSFKPTFLLAVPRVFEKVYNSAEQKAEAGGKGKIFRR
AADVAVAHSIAVEAGSVPLALKLQFLLFDRLVYSKLRTAMGGNVRFAVSGSAPLGDRLGH
FFHSLGIKILEGYGLTETTAPASVNRTERFKIGTVGPAMPGVSIRIADDGEIQVRGIDVF
GGYWNNEAATAEAFDGEWFRTGDLGTLDEDGYLRVTGRKKEIIVTAGGKNVAPAALEDPI
RANPLVGQVVVVGDQRPFIAALITLDPEMLPTWLGNNGQSSSLSLEDAAVNPAVLAEVQR
AVDAANATVSRAESIRKFVILPTEFTEASGHLTPKMSIKRSVILADYADTIAAVYSAAPA
TEGISLR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtggaacagttcgattcccccctcgtggtggccgcagacccgcatgcgaacacgacggcg
ctgctgctcgaccgcgtgcgcgagagtccggaccgccccctcttcgccctccccgacggc
gacggctggcgcgatgtcaccgctcagcagttcctcgaccaggtggtcgcgctcgccaag
ggcttcgtcgcctcgggcatcgagccgggcgagaagatcgggctgatctgcaagacccgg
tacgagtggacgctgatcgacttcgccgtctggttcgcgggcggcgtcctggtgccggtc
tacgagacctcctcccccgcgcaggtgcagtggaacctggccgactccggagcccacgcc
gtcatcgtcgagacggccgaccacttcgcccgcttcgacgaggtccgcgccgacctgccc
gaggtgcggaccgcctggcagatcggactgggcgacctcgacaagctcgcgcggcgcgga
gtcgacgtcccggacgccgagatcgagcgccgacgctcgctcgccacgggctccgacatc
gcgacgatcatctacacctccgggtccaccggccgccccaagggctgcatcatccgccac
tcgaacttcgtcgagctgagccggaactcggcggtcgcgctgaccgagctgatccaccag
cccggcgcctccacgctgctcttcatcacgacggcccacgtcttcgcccgcttcatctcg
atcctctgcgtgcacggcggagtgaaggtcgggcaccaggccgacaccaagcagctgctg
ccctcgctcggatcgttcaagccgaccttcctcctggccgtgccgcgggtcttcgagaag
gtgtacaactccgccgagcagaaggccgaggcgggtggcaagggcaagatcttccggcgg
gcggccgatgtcgccgtggcccactcgatcgcggtggaggccggatcggtcccgctcgcg
ctcaagctgcagttcctcctcttcgaccgtctcgtctactcgaagctgcggacggcgatg
ggcggcaacgtgcgcttcgccgtgtcgggatccgctccgctgggcgaccgcctgggccac
ttcttccacagcctcgggatcaagatcctcgagggctacggcctcaccgagaccacggcg
cccgcgagcgtcaaccgcaccgagcgcttcaagatcggcaccgtcggcccggcgatgccc
ggagtgtcgatccgcatcgcggacgacggcgagatccaggtgcgcgggatcgacgtgttc
ggtggctactggaacaacgaggcggcgacggccgaggccttcgacggcgagtggttccgc
accggcgacctcgggacgctcgacgaggacggctatctccgcgtcaccgggcgcaagaag
gagatcatcgtcaccgccggcggcaagaacgtcgccccggccgccctcgaggatccgatc
cgcgcgaacccgctcgtggggcaggtcgtcgtcgtgggcgaccagcggccgttcatcgcc
gcgctgatcactctcgaccccgagatgctgccgacgtggctcggcaacaacggacagagc
tcgagcctctcgctcgaggacgcggccgtgaacccggcggtcctcgccgaggtgcagcgc
gccgtcgacgccgccaacgcgaccgtgtcccgcgcggagtcgatccgcaagttcgtcatc
ctgcccaccgagttcaccgaggcgagcggacacctcaccccgaagatgagcatcaagcgc
agcgtgatcctcgccgactacgcggacaccatcgcggcggtgtactcggcggcgccggct
accgaaggcatctcgctccgatag
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