KEGG   Rathayibacter sp. VKM Ac-2759: GSU68_08630
Entry
GSU68_08630       CDS       T10520                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rath  Rathayibacter sp. VKM Ac-2759
Pathway
rath03030  DNA replication
rath03430  Mismatch repair
rath03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rath00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GSU68_08630
   03430 Mismatch repair
    GSU68_08630
   03440 Homologous recombination
    GSU68_08630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rath03032]
    GSU68_08630
   03400 DNA repair and recombination proteins [BR:rath03400]
    GSU68_08630
Enzymes [BR:rath01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GSU68_08630
DNA replication proteins [BR:rath03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GSU68_08630
DNA repair and recombination proteins [BR:rath03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GSU68_08630
SSDB
Motif
Pfam: RNase_T HTH_psq
Other DBs
NCBI-ProteinID: QHC68491
LinkDB
Position
complement(1878158..1878850)
AA seq 230 aa
MARRWFDELAVFDLETTGIDVRTSRIVTAHVGVIDASGTPVEATTWLADPGVEIPAGASA
VHGISTEYAREHGRPAGEVVAEISEALRSLLEREIPVVVYNAPYDLSLLAHESRRWGVPV
LLDPSPVIDPLVIDKAVDRYRKGKRTLVHAAEHYGVALTDAHDAGADAVAAGRLAQALGR
TFADELGTDARALHALQIDWCRTQAESFQEYMRRVRDEAFVADRAWPVRH
NT seq 693 nt   +upstreamnt  +downstreamnt
gtggcgcgccgctggttcgacgagctcgccgtcttcgacctcgagaccaccgggatcgac
gtgcggacgagccggatcgtcaccgcgcacgtcggcgtgatcgacgcctcgggcacgccc
gtcgaagccaccacctggctcgccgaccccggggtcgagatccccgcgggcgccagcgcc
gtccacggcatcagcaccgagtacgcccgcgagcacgggcggccggccggcgaggtcgtc
gccgagatctcggaggcgctccgctcgctcctcgagcgcgagatccccgtggtcgtctac
aacgccccctacgatctctcgctcctcgcccacgagtcgcgccgctggggcgtccccgtg
ctgctcgacccgagccccgtcatcgatccgctggtcatcgacaaggcggtcgaccgatac
cgcaagggcaagcgcacgctggtgcacgccgccgagcactacggagtcgcgctcacggac
gcccacgacgcgggagccgacgccgtcgccgccgggcggctcgcccaggccctcggccgc
accttcgccgacgagctgggcaccgacgcccgcgccctgcacgccctccagatcgactgg
tgccgcacccaggccgagtccttccaggagtacatgcgccgcgtccgcgacgaggcgttc
gtcgccgaccgcgcgtggcccgtccgccactga

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