Rathayibacter sp. VKM Ac-2759: GSU68_09575
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Entry
GSU68_09575 CDS
T10520
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rath Rathayibacter sp. VKM Ac-2759
Pathway
rath03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rath00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSU68_09575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rath03019
]
GSU68_09575
03009 Ribosome biogenesis [BR:
rath03009
]
GSU68_09575
Messenger RNA biogenesis [BR:
rath03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GSU68_09575
Ribosome biogenesis [BR:
rath03009
]
Eukaryotic type
Pre-60S particles
RNases
GSU68_09575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QHC66789
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All DBs
Position
2084989..2085609
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AA seq
206 aa
AA seq
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MSSAPDRLVWIDCEMTGLDLGVDELVEIAVVVTDFDLEPLDEGLSIVIKPSDSALANMGD
FVRTMHETSGLLEEIPSGVGVAEAEYEVLEYVLKHVPSEQHAPLAGNSIGTDRAFLVKYM
PKLDSHLHYRNVDVSTVKELARRWFPRVYFNAPAKHGGHRALADILESIRELRYYRRAAF
IAEPGPTTAEVQAVSAAVVDEFASRM
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgcccccgatcgtcttgtctggatcgactgcgagatgacggggctcgacctc
ggcgtcgacgagctcgtcgagatcgccgtcgtcgtcaccgacttcgacctcgagcccctc
gacgagggcctgtcgatcgtgatcaagcccagcgactccgcgctggcgaacatgggcgac
ttcgtgcgcaccatgcacgagacgtccgggctcctcgaggagatcccctccggtgtcgga
gtggccgaggccgagtacgaggtgctcgagtacgtgctgaagcacgtcccctccgagcag
cacgcgccgctcgccggcaactccatcggcacagaccgcgccttcctggtcaagtacatg
cccaagctcgactcccacctccactaccgcaacgtcgacgtctcgaccgtcaaggagctc
gcccgccgctggttcccgcgcgtctacttcaacgctccggccaagcacggcggccaccgc
gccctcgccgacatcctcgagagcatccgcgagctgcgctactaccgcagggccgcgttc
atcgcggagcccggcccgaccaccgccgaggtgcaggccgtctcggccgccgtcgtggac
gagttcgcgtcacggatgtag
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