Rathayibacter sp. VKM Ac-2759: GSU68_11405
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Entry
GSU68_11405 CDS
T10520
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rath Rathayibacter sp. VKM Ac-2759
Pathway
rath00300
Lysine biosynthesis
rath00470
D-Amino acid metabolism
rath01100
Metabolic pathways
rath01110
Biosynthesis of secondary metabolites
rath01120
Microbial metabolism in diverse environments
rath01230
Biosynthesis of amino acids
Module
rath_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rath00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GSU68_11405 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GSU68_11405 (lysA)
Enzymes [BR:
rath01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GSU68_11405 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
FAS_AT_central
Motif
Other DBs
NCBI-ProteinID:
QHC67111
UniProt:
A0A6P1FF13
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All DBs
Position
complement(2463555..2464988)
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AA seq
477 aa
AA seq
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MENDDAPARAPRHPLAPEWLLAPAEADSLVDGVWSENTERDDDGVLRVAGVTATALAAQF
GTPLYVVDEDDARRRAVRTRDAFARELGRIGTGVTVYYAGKAFLSTEVARWMRDEGLNID
LSSGGELAVALAAGIEPERLGLHGNNKSLAEIDRAVEVGLGTIVLDSLIEIERVAAAAER
HGSVQAVRLRVNSGVHAHTHEFLATAHEDQKFGITLADCPEAVARIRSHASLRFLGLHCH
IGSQIFGSAGFAESASRLLEVHAALLAGGPVPELNLGGGFGIAYTSADDPTPIDEIAAAI
ADAVAAQCTSRGIPVPHIAIEPGRSLIGPAGLTLYEVGTIKDVVVGADGAVRRYVSVDGG
MSDNARPAIYGADYTARIAGRSSGAEPALVRVAGKHCESGDIVVHDDYLPADVQPGDLLA
VAATGAYCWSLSSNYNHLGRPPVVAVRDGRARVIVRGENEDDLLRRDAGIERKAILR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaacgacgacgcgcccgcccgcgccccgcgtcatccgctcgcacccgagtggctc
ctcgcccccgccgaggcggactcgctcgtcgacggcgtctggtccgagaacaccgagcgc
gacgacgacggcgtcctccgcgtcgcgggcgtcaccgccacggcgctcgccgcgcagttc
ggcactccgctctacgtcgtcgacgaggacgacgcccgccgtcgtgcggtgcggacccgc
gacgccttcgcgcgcgagctcggccggatcggcaccggcgtcaccgtctactacgcgggc
aaggccttcctctcgaccgaggtcgcccgctggatgcgcgacgagggcctcaacatcgac
ctgtcgagcgggggcgagctcgccgtcgctctcgccgcgggcatcgagcccgagcggctc
gggctgcacggcaacaacaagtcgctcgccgagatcgaccgcgcggtcgaggtcggactg
ggcacgatcgtcctcgacagcctgatcgagatcgagcgggtcgccgcggcggccgagcgg
cacggcagcgtgcaggcggtgcggctgcgcgtgaacagcggagtgcacgcgcacacccac
gagttcctcgccaccgcgcacgaggaccagaagttcggcatcacgctcgccgactgcccg
gaggcggtcgcccgcatccgctcgcacgcgagcctgcgcttcctcggcctgcactgccac
atcggctcgcagatcttcggctccgccgggttcgcggagtcggcctcgcgcctgctcgag
gtgcacgcggcgctgctcgcgggcggccccgtccccgagctcaacctcggcgggggcttc
ggcatcgcctacacgagcgccgacgacccgacgccgatcgacgagatcgccgcggccatc
gccgacgcggtcgccgcgcagtgcacgagccgcggcatcccggtgccgcacatcgcgatc
gagcccggccgctcgctgatcggcccggccggcctgaccctctacgaggtcggcacgatc
aaggacgtcgtcgtcggcgcggacggtgcggtccggcgctacgtgagcgtcgacggcggg
atgagcgacaacgcccgccccgccatctacggagccgactacaccgcgcggatcgccggc
cgctcctccggcgccgagcccgccctcgtgcgcgtggcgggcaagcactgcgagtcgggc
gacatcgtcgtgcacgacgactacctgcccgccgatgtgcagcccggcgacctcctcgcg
gtcgccgcgaccggcgcctactgctggtcgctgtcgagcaactacaaccacctcggacgc
cccccggtcgtcgccgtgcgcgacggccgcgcccgcgtgatcgtgcggggagagaacgag
gacgacctcctccgccgcgacgccggcatcgaacgaaaggccatcctccgatga
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