Rathayibacter sp. VKM Ac-2759: GSU68_13350
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Entry
GSU68_13350 CDS
T10520
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rath Rathayibacter sp. VKM Ac-2759
Pathway
rath03420
Nucleotide excision repair
rath03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GSU68_13350
03430 Mismatch repair
GSU68_13350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rath03400
]
GSU68_13350
Enzymes [BR:
rath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSU68_13350
DNA repair and recombination proteins [BR:
rath03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSU68_13350
MMR (mismatch excision repair)
Other MMR factors
GSU68_13350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_22
DEAD
Hydro_N_hd
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QHC67454
LinkDB
All DBs
Position
complement(2877279..2879738)
Genome browser
AA seq
819 aa
AA seq
DB search
MSFLFDPSDSRATPVVVGVPARSGSDAPRSDPAHEQLVAGLNPQQREAVEYRGDALLIVA
GAGSGKTSVLTRRIASLLGNAEAWPSQILAITFTNKAAAEMRERVEKLVGASAEGMWIST
FHSACVRILRREAENFGMTSSFTIYDSGDQRALLKRIVKDLEADSLGITVASASAKISKL
KNELADVDSYARTANMSDPNEEMFLQVFRAYSRALESANAFDFDDLIAQTVYLFRAFPHV
AAKYQRRFRHVLVDEYQDTNHAQYSLIHELTRPVPRATMDAAQFDRPYRGPVTADGSIPG
ASLTVVGDSDQSIYAFRGADIRNIVEFERDFPGCRVILLEQNYRSTQNILSAANAVISNN
FDRRAKNLWSSSGDGEKIIGYTGYSGHDEAQFVVDEIARLHAAGTGYDEIAVFYRTNAQT
RALEEIFIRSALPYRILGGTKFYERAEIKDALAYLITVANPADVLALRRIMNTPKRGIGP
ATEAQLQSFADTNGVTLREAMRNAGSLGMGPKVTKAIVDLATLLDECAMMLDPSRPEGEA
KVHEVLSSLLSRSGYIDMLRASRDPQDEARAENVDELIAVTKEFARNNPDGGLVDFLTEV
SLVAAADDLDDDSGTVSLMTLHTAKGLEYDAVFLTGIEEDLLPHRISANEPGGPAEERRL
FYVGITRARKRLYLSLAMTRAQYGETSVAMPSRFLQEIPAELIQWRQSPGAATSRGGTQP
RALNAQRPGFGKSRSNAEFREALAAAPKAKGEFPNRITGMVRDNGDLELIAGDRIRHTDF
GEGRVNAVTGEGSKRVAHVLFDQVGAKKLLIKVAPIEKI
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcctcttcgatccgagcgattcccgcgccacccccgtcgtcgtcggcgtcccc
gcgcgctccgggagcgacgctccgcgcagcgaccccgctcacgagcagctcgtcgcgggc
ctcaatccccagcagcgcgaggcggtcgagtaccgcggcgatgcactcctgatcgtggcc
ggcgccgggtcgggcaagacgagcgtgctcacccgccgcatcgcgagcctcctcggcaac
gcggaggcgtggccgagccagatcctcgcgatcaccttcaccaacaaggccgccgccgag
atgcgcgagcgcgtcgagaagctggtcggggcgagcgccgaggggatgtggatctcgacc
ttccactcggcgtgcgtgcgcatcctgcgccgcgaggccgagaacttcggcatgacctcg
tcgttcaccatctacgactcgggcgatcagcgcgcgctgctcaagcgcatcgtgaaggac
ctggaggccgactcgctcgggatcaccgtcgcgagcgcctccgccaagatctccaagctc
aagaacgagctcgccgacgtcgactcgtacgcgcgcaccgcgaacatgagcgaccccaac
gaggagatgttcctccaggtcttccgcgcgtactcgcgcgccctcgagagcgccaacgcg
ttcgacttcgacgacctgatcgcgcagacggtctacctgttccgcgccttcccgcacgtc
gcggccaagtaccagcggcgcttccgccacgtcctggtcgacgagtaccaggacacgaac
cacgcgcagtactcgctcatccacgagctgacccggccggtcccgcgggcgacgatggac
gccgcgcagttcgaccggccctaccgcgggccggtgacggccgacggctcgatccccggc
gcctcgctcacggtcgtgggcgactccgaccagtcgatctacgcgttccgcggagccgac
atccgcaacatcgtcgagttcgagcgcgacttcccgggctgccgcgtgatcctgctcgag
cagaactaccgctcgacccagaacatcctctcggcggccaacgcggtcatctcgaacaac
ttcgaccgccgcgccaagaacctctggtcctcgagcggcgacggcgagaagatcatcggc
tacacgggctactccggccacgacgaggcccagttcgtggtcgacgagatcgcgcggctg
cacgcggccggcaccggctacgacgagatcgcggtgttctaccgcaccaatgctcagacc
cgtgcgctggaggagatcttcatccgctcggcgctgccgtaccggatcctcggcggcacc
aagttctacgagcgcgccgagatcaaggacgcgctcgcctacctgatcacggtcgcgaac
ccggccgatgtgctggcgctgcggcggatcatgaacacgcccaagcggggcatcggcccg
gcgacggaggcgcagctgcagtcgttcgccgacaccaacggcgtgaccctgcgcgaggcc
atgcgcaacgccggctcgctcggcatgggcccgaaggtgacgaaggcgatcgtcgatctg
gcgaccctcctcgacgagtgcgcgatgatgctcgacccctcgcgaccggagggcgaggcg
aaggtgcacgaggtgctctcgtcgctgctcagccgcagcggctacatcgacatgctgcgc
gccagccgcgacccgcaggacgaggcacgcgccgagaacgtcgacgagctcatcgccgtg
acgaaggagttcgcgcgcaacaaccccgacggcggactcgtcgacttcctcaccgaggtc
tcgctcgtcgcggccgcggacgacctcgacgacgactccggcaccgtctcgctgatgacc
ctgcacacggccaagggcctcgagtacgacgccgtgttcctcacaggcatcgaggaggac
ctgctgccgcaccgcatctcggcgaacgagcccggcgggccggccgaggagcggcggctc
ttctacgtcggcatcacgcgggcgcgcaagcgcctctacctctcgctcgccatgacccgc
gcccagtacggcgagacctcggtcgcgatgccgagccggttcctccaggagatcccggcc
gagctgatccagtggcggcagtcgcccggtgcggccacgtcgcggggcggcacccagccg
cgggccctcaacgctcagcggccggggttcggcaagtcgcgctccaacgccgagttccgc
gaggcgctcgccgcggctccgaaggccaagggcgagttccccaaccgcatcaccgggatg
gtccgcgacaacggcgatctcgagctgatcgcgggcgaccgcatccgccacaccgacttc
ggcgagggccgggtgaacgcggtgaccggcgagggcagcaagcgggtcgcccacgtgctg
ttcgaccaagtcggtgcgaagaagctgctgatcaaggtcgcgccgatcgagaagatctga
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