Rathayibacter sp. VKM Ac-2759: GSU68_13580
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Entry
GSU68_13580 CDS
T10520
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rath Rathayibacter sp. VKM Ac-2759
Pathway
rath03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rath00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GSU68_13580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rath03021
]
GSU68_13580
03400 DNA repair and recombination proteins [BR:
rath03400
]
GSU68_13580
Enzymes [BR:
rath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GSU68_13580
Transcription machinery [BR:
rath03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GSU68_13580
DNA repair and recombination proteins [BR:
rath03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GSU68_13580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QHC67496
UniProt:
A0A6P1F9D8
LinkDB
All DBs
Position
complement(2924171..2925157)
Genome browser
AA seq
328 aa
AA seq
DB search
MLIAQRPTLTEENISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVREDVTEIILNIKGLVVSSEHDEPITAYLRKQGAGQVTAADISAPAGVEIHN
PDLVIATLNDKAKFELELTIERGRGYVSATQNRSEFSEAGQIPVDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVESKPAITPRDAIASAGRTLTELFGLARELNTAAEGIEIGPAPVD
AVLSTELSMPIEDLDLSVRSYNCLKREGINNVNELVALSETQLMNIRNFGQKSVDEVKEK
LTELGLSLKDSVPGFDGAHFYSYDDESI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgcttatcgcacagcgcccgacgctcaccgaggagaacatctcggagttccgttcccgc
ttcgtcatcgagcccctcgagcccggcttcggctacacgctcggcaactcgctgcgtcgc
accctgctgtcctccatccccggcgccgctgtcaccagcatccggatcgacggagtgctg
cacgagttcacgacggtcccgggagtccgcgaggacgtcaccgagatcatcctgaacatc
aagggactcgtcgtctcgtccgagcacgacgagccgatcaccgcctacctgcgcaagcag
ggcgcgggtcaggtcaccgccgcggacatctcggctccggccggtgtcgagatccacaac
ccggacctcgtcatcgccacgctgaacgacaaggccaagttcgagctcgagctgacgatc
gagcgcggccgcggctacgtctcggcgacccagaaccgcagcgagttctccgaggccggc
cagatcccggtcgactcgatctactcgcccgtgctcaaggtcacctaccgcgtcgaggcg
acccgtgccggtgagcgcaccgacttcgaccgcctggtcgtcgacgtcgagtcgaagccg
gcgatcacgccgcgcgacgccatcgcgtcggccggtcgcacgctgaccgagctgttcggt
ctcgcccgcgagctcaacaccgcggccgagggcatcgagatcggccccgcgccggtcgac
gccgtcctctcgaccgagctgtcgatgcccatcgaggacctcgacctctccgtgcgcagc
tacaactgcctgaagcgcgagggcatcaacaacgtcaacgagctcgtcgccctgtcggag
acgcagctcatgaacatccgcaacttcggacagaagtcggtggatgaggtcaaggagaag
ctgaccgagctgggcctgtcgctgaaggactcggtccccgggttcgacggagcccacttc
tacagctacgacgacgagagcatctag
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